| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0095 |
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| Symbol | |
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| ID | 4117666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 99155 |
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| End bp | 99943 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 638034888 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_642887 |
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| Protein GI | 108802950 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCGT TCACCAAGAT GCACGGCGCT GGCAACGACT TCCTCCTCTT CGACTGGGAG
GAGGTCGAGG GCGCGGACCT CGCGGAGCTC GCCCGGAGGG CCTGCGACCG GCACTTCGGG
GTCGGGGCCG ACGGCATCCT CGTCCCCGCC CCCTCCGCAA GCGCCGACCT ACGCATGGTC
TACCGCAACG CCGACGGCTC GCCCTCCGAG ATGTGCGGCA ACGGCATCCG CTGCCTGGCC
CGCTACGCCC GCGACAGGGG GATCGTCTCC GGGGACGTTC TGGCCGTGGA GACGGGGGCG
GGCGTCCGGA AGGTCGCACT CCTGGAGGGG GGGCGCGCGA GCCGGGTGGA GATGGGAAGC
CCGGCCTTCG GCGCGCCGGT GGCGCTGCTC GGCCACCGCT TCGTGCGGGT CTCCATGGGC
AACCCGCACG CGGTGGCCTT TCTCCCCGCG GAGGAGGCGG TGGAGCGGCT CGACCTGCGC
TCCGTGGGGC CCAGGGTCGA GCGCGACCCC GCCTTCCCCG GCCGCACGAA CGTGGAGTTC
GTCTGCGTCC GCGGCCCGCA CGAGCTCAGG ATGCGCATCT GGGAGCGGGG GGCGGGCGAG
ACGCTGGCCT CCGGCTCCGG GTCGTGCGCC GCCGCGGCGG CCGCCATCCG GGAGGGGCTC
GCCCGCGGAC CGGTCCGGGT CATCCTGGAC GGCGGGGAGG TGGAGGTGGA GTGGTCCGGG
CGCGAAGGGG ACCCGCTGTA CATGAGGGGC CCGGCGGAGT ACGTCTGCGA GGGGCGGCTG
CTGCTCTAG
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| Protein sequence | MTAFTKMHGA GNDFLLFDWE EVEGADLAEL ARRACDRHFG VGADGILVPA PSASADLRMV
YRNADGSPSE MCGNGIRCLA RYARDRGIVS GDVLAVETGA GVRKVALLEG GRASRVEMGS
PAFGAPVALL GHRFVRVSMG NPHAVAFLPA EEAVERLDLR SVGPRVERDP AFPGRTNVEF
VCVRGPHELR MRIWERGAGE TLASGSGSCA AAAAAIREGL ARGPVRVILD GGEVEVEWSG
REGDPLYMRG PAEYVCEGRL LL
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