Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0093 |
Symbol | |
ID | 4117664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 95843 |
End bp | 98413 |
Gene Length | 2571 bp |
Protein Length | 856 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638034886 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_642885 |
Protein GI | 108802948 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGGTT CTGGCCGCAG GCCGCTCAGG GTGCTGCTCG TCGAGGACTC CGAGGACGAC GCGCTGCTCC TGCTCCGGGA GCTGCGGCGG GCCGGCTACG AGCCCGAGCA CGAGGTGGTG TACACCGCCG GGGCCATGGA GCGCGCCCTC GAGCGGGGCC GGTGGGACAT AGTGCTCTCC GACCACTCCA TGCCCGCCTT CAGCTCCTTT GCGGCGCTCG AGCTGCTGCG CCGGCGGGGG CTCTTCGAGG AGCTGCCGTT CATCCTCGTC TCCGGCAAGA TAGGCGAGGA GGCCGCCGCG GCGGTCATGA AGGCGGGGGC CCACGACTAC GTCATGAAGG ACAACCTCGC CCGCCTCGGC GTCGCCATCG AGCGCGAGCT GCAGGAGGCG GAGGTGCGCC GGGAGCGGCG GCGGGCCGAG CGCCGCTACC GGCTGATGTT CGAGCAGTCG CCGCTGAGCA TCCAGATCTT CTCCCCCGAC GGCCGGATGG TGAGCGCCAA CCGGGCCTGG CGGCGGCTGT GGGGGGTCGA GCCCGAGCAG CTCGCCGGCT ACAACGTGCT CGAGGACCCC CAGCTCCTGG AGAGCGGGGT GATGCCCTAC ATCCGGCAGG GCTTCGCCGG CCGGGCGGCG GTCGTGCCGC CGGTGAGGTA CGAGCCGGAC CGCACCGTGC CCGGCCTCTC CTCGGTGCCC TACCGGTGGG TGCGCGCCTT CATCTACCCG GTGGTGGGTG AGGAGGGCGA GGTGCAGGAG GTCGTCCTCA TCCACGAGGA CATCACCGAG ACCCGCAGGG CCTGGGATGC CCTGCAGGAG GCGGAGAGAA AGTACCGCTC CATCTTCGAG AACGCGGTGG AGGGCATCTT CCAGAGCACC CCCGAGGGGC GGCTGCTCAC GGCCAACCCC GCCATGGCCC GGATGCTGGG CTACGGCTCC CCGGAGGAGC TTCTGGCCTC CGTGGGGAGC ATCGCCCGGC TCTACGCCGA TCCGGAGCGG CGGGACGAGT TCCGGCGGCA GGTGGAGGCG CGCGGCTCCG TCTCCGGCTT CGAGCTCCGG CTCCGCCGGC GGGACGGCGG CACGATCTGG GCCTCCCTCG CCGGGCGCGC CGTGCGGGAC CCCGAGGGGC GCCTCCTGGG CTACGAGGGG ACGCTCGAGG ACATCACCGG GCGCAAGCGG GCCGAGGAGG CGCTCAGGCA GAGCGAGGAG CTCTACCGCT CCGTGGTCGA GCAGGCCCAG GAGAACATCC TGCTGGTGGA CCTCGAGACC CGGCGCATCC TGCAGTCCAA CCCGGCCTTC CGCAGGACGC TCGGCTACGC CGAGGAGGAG CTGCGGGGGA TGACCCTCTA CGACATCGTG GCCCACGACC GGCAGAGCAT AGACCGCAAC ATCGAGCGGA TAAGGCGTTT GCGGCGGCAC TCGCCGGGCG AGCGGCGCTA CCGGCGCAGG GACGGCTCGC TCGCCCACAT GGAGGTCAGC GTGAGCGTCA TCTCCTACGA CGGCAGGGAC GCGATGTGCG TGGTCGCCCA CGACGTGACC GAGCGCAAGC GGGCCGAGGA GGAGCTGCGG GAGAGCGAGG AGCGCTACCG GGCCGTCGTC GAGCAGACCG CCGAGGGGCT CTTTCTGCAC GACCCCGAGA CCCGGCGCAT AGTGGCCACC AACCGCGCCT TCCGCCGGAT GTTCGGCTAC ACCGAGGAGG AGCTGCGGGG GATGAGCATC TACGAGCTCG TCGAGGACAG CCCGGAGAAC GTCGAGCGCA ACATCCGGCG GACCCTCGAG AACCCGGAGT ACTGCTACGT GGGCGAGCGG CGCTACCGGC GCAAGGACGG CTCCATACTG GAGGTCGAGG GCAGCGGCGG CGTCATCTAC TACGCCGGCC GCCGGGTCAT CTGCTCGATG GTCCGGGACA TCACCGAGCG CAAGCGGTCC GAGCGGGCGA TGCGCGAGAT CCGGGAGGCC GAGCGGCGCA GGATCTCGCG CGAGCTGCAC GACGGGGTGC TGCAGGACCT GACCTATGCC CTGCAGTCCA TGCAGATAGA GCGGCGCATC TCGGGGAGGA CGAGCGAGGA GCGCGAGCGC CAGATAGACG CCCTCCGGCG CGCGGTCGAG GGGCTGCGGG AGGCGATCTA CGAGCTGCGC TCCGAAGGGG TGGCCGACCG TCCGCTCCTC CGCTCGGTGG AGTCGCTGGT GGAGCTGCAC CGCCAGCGCT CGCCGCACCG GGAGGCGCGG CTGGTGGTCG CCGGGGGCTT CCCCGCCGGC CTCTCGGGGC CCGCCGCCGC GGAGGTGGCC CGCGTGGTGC AGGAGGCGCT CGCCAACGTC CGCCGCCACT CGGGGGCGGG CCGGGTGGAG GTCCGGCTCT CGGTGGAGGA CGAGGAGGTG GTGGTGGAGA TAGAGGACGA CGGGCGTGGC TTCGACCCCG CCTCGTCGGG GGGCGGCGTG GGGCTCGTGG GGATGCGGGA GCGGGCCCAG GCCCTGGGGG GCCGCCTGGA GGTGGAGAGC CGGCCCGGGG AGGGCGCCTG CGTCCGGCTG CGGGCCCCCC TCCCGGCGCT CTCCGGCTCG CCCGCCGCGC CCCGCCGCTA G
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Protein sequence | MSGSGRRPLR VLLVEDSEDD ALLLLRELRR AGYEPEHEVV YTAGAMERAL ERGRWDIVLS DHSMPAFSSF AALELLRRRG LFEELPFILV SGKIGEEAAA AVMKAGAHDY VMKDNLARLG VAIERELQEA EVRRERRRAE RRYRLMFEQS PLSIQIFSPD GRMVSANRAW RRLWGVEPEQ LAGYNVLEDP QLLESGVMPY IRQGFAGRAA VVPPVRYEPD RTVPGLSSVP YRWVRAFIYP VVGEEGEVQE VVLIHEDITE TRRAWDALQE AERKYRSIFE NAVEGIFQST PEGRLLTANP AMARMLGYGS PEELLASVGS IARLYADPER RDEFRRQVEA RGSVSGFELR LRRRDGGTIW ASLAGRAVRD PEGRLLGYEG TLEDITGRKR AEEALRQSEE LYRSVVEQAQ ENILLVDLET RRILQSNPAF RRTLGYAEEE LRGMTLYDIV AHDRQSIDRN IERIRRLRRH SPGERRYRRR DGSLAHMEVS VSVISYDGRD AMCVVAHDVT ERKRAEEELR ESEERYRAVV EQTAEGLFLH DPETRRIVAT NRAFRRMFGY TEEELRGMSI YELVEDSPEN VERNIRRTLE NPEYCYVGER RYRRKDGSIL EVEGSGGVIY YAGRRVICSM VRDITERKRS ERAMREIREA ERRRISRELH DGVLQDLTYA LQSMQIERRI SGRTSEERER QIDALRRAVE GLREAIYELR SEGVADRPLL RSVESLVELH RQRSPHREAR LVVAGGFPAG LSGPAAAEVA RVVQEALANV RRHSGAGRVE VRLSVEDEEV VVEIEDDGRG FDPASSGGGV GLVGMRERAQ ALGGRLEVES RPGEGACVRL RAPLPALSGS PAAPRR
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