Gene Rxyl_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0084 
Symbol 
ID4117656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp87919 
End bp89103 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content70% 
IMG OID638034878 
Productputative metal cation transporter 
Protein accessionYP_642877 
Protein GI108802940 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0428] Predicted divalent heavy-metal cations transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0204123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGGACG GAAAGCGCGG GGCGGGCTGG GTGCTTCTCG GGCTCTTGCC GCTCCTGGGG 
CTCGGGGCGC TGCTGGCGCT CGTCGTGCTC AAGGGGGCGG GGGTGGACAG GGAGGACCGC
CCGCCCGTCG AGGAGCTCAC CGTCGAGCGG GTGGCGCTGC CCGCGCCGCA CGAGATCGTG
GTCTACGTTA GGAACGGCGG GCCCGAGCCG GTGACGGTGA GCCAGGTCGC GGTCAACGAG
GCGCTGTGGG ACTTCGAGGC CGAGCCGGAG AGGACGATCA CGCCTCTCCG GTCGGCGGAG
ATCACGCTCC CCTACTCGTG GGTCGAGGGC GAGGCGTACG AGATAGAGCT CATCACGAGC
ACGGGCGCGA CCTTCGCCGC CGAGGTGCCG GTGGCGGTCT TGACGCCGGG GTTTTCGGCG
GGGACTCTGG GACGCTACGC CCTGATCGGG CTCTACGTCG GCGTGATCCC CGTCTCTTTG
GGTCTGCTGT GGTACCCGTT CTTGCGGCGC ATGGGCGCTT CGGGGATGAA CTTCGTGCTG
GCGCTGACGG TGGGGTTGCT TGTCTTCCTG GTGCTCGACA CGCTGCTGGA CGCCATGGAG
ATCGCCGGAA GATTGCCGGG GGTTTTCTCC GGGGTTCCGC TGGTGCTCTC GGCGGCGCTT
CTTGCCCTGC TGGGGCTTCT CGGCACCGAA CGTCTCTTCC GGCGCGGGCG CGAAGGGGCG
GGCCGGCTCT CGACCTCCTA CCGGATAGCG CTGGGGATAG GCCTGCACAA CCTGGGGGAG
GGGCTGGCCA TCGGGGCGGC GTTCGCTCTC GGAGAGGCGG CGTTGGGGGC GTTTCTGGTC
GTCGGGTTTA CCTTGCACAA CGTCACCGAG GGCGTGGGCA TCGCCGCGCC CGTCTTGAAG
GGGGAGGGGC CGCGTCCGGC GCACTTCGCC GGGCTCGCTC TTTTGGGGGG CGGACCGGCC
ATCCTGGGGA CCTGGATCGG GGGCTTCGCC TATTCCAACC TGGCCTCCTC GGTCTTCCTG
GCCGTCGGTG CGGGGGCCAT CCTCCAGGTC GTCTACGAGG TGGGGCGGCT GCTCCTCGAA
GATTCCGTTC GGGCCGGGGC TCCGGTCCTT TCCGCTCCCA ACCTGGCCGG GTTTGCGGCG
GGGATGGCCG TGATGTACGC AACGGCCCTC TTGGTGAGCG TGTAG
 
Protein sequence
MGDGKRGAGW VLLGLLPLLG LGALLALVVL KGAGVDREDR PPVEELTVER VALPAPHEIV 
VYVRNGGPEP VTVSQVAVNE ALWDFEAEPE RTITPLRSAE ITLPYSWVEG EAYEIELITS
TGATFAAEVP VAVLTPGFSA GTLGRYALIG LYVGVIPVSL GLLWYPFLRR MGASGMNFVL
ALTVGLLVFL VLDTLLDAME IAGRLPGVFS GVPLVLSAAL LALLGLLGTE RLFRRGREGA
GRLSTSYRIA LGIGLHNLGE GLAIGAAFAL GEAALGAFLV VGFTLHNVTE GVGIAAPVLK
GEGPRPAHFA GLALLGGGPA ILGTWIGGFA YSNLASSVFL AVGAGAILQV VYEVGRLLLE
DSVRAGAPVL SAPNLAGFAA GMAVMYATAL LVSV