Gene Rxyl_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0082 
Symbol 
ID4117654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp86181 
End bp86675 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content70% 
IMG OID638034876 
ProductTQO small subunit DoxD 
Protein accessionYP_642875 
Protein GI108802938 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000522418 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTGGG TGCGGGTACT GGTGGGGGCC GTGTGGCTCA ACGGGGGGCT TGAGAAGCTC 
CTCAACCCGG ACTTCCCCCG CGAGTTCGCG GCCAGCCTGC AGGCGGGGGG TTTCGTCTCG
GCGGCTCCTG CCTTCTTCCG CGTCTTCATG CAGAACAACG TGGTGCCCAA CGCCGAGCTG
GTGGCTCAGG TGGTGAGGGC GGCGGAGCTG GCGATGGGGG TGGCGCTCAT CCTGGGGCTT
TTCACCAACC TGGCCGCGCT CGGGAGCGTG GCGCTGAGCG TCATGATCCT CCTCTCCCAG
GGCGGGGTGA GCCTCGGCAC CGGGCTCGGC TCGCCGCAGT TTTTCACCAT AAACGTGGTG
ATGGCGGCGC TCTCCCTGAT CATCCTCTTC AGCCCGGCGG CGAAGGAGGC CTCGCTCGAC
GCCGGGCTCT CGCGGCGGCG CCCCGGTCTC TCGCCGCTGC TCACCAACAC CGCCGGCCGG
CGGCGCCGGA GGTAG
 
Protein sequence
MTWVRVLVGA VWLNGGLEKL LNPDFPREFA ASLQAGGFVS AAPAFFRVFM QNNVVPNAEL 
VAQVVRAAEL AMGVALILGL FTNLAALGSV ALSVMILLSQ GGVSLGTGLG SPQFFTINVV
MAALSLIILF SPAAKEASLD AGLSRRRPGL SPLLTNTAGR RRRR