Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0079 |
Symbol | |
ID | 4117923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 82982 |
End bp | 83638 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 638034873 |
Product | 2-keto-3-deoxy-phosphogluconate aldolase |
Protein accession | YP_642872 |
Protein GI | 108802935 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.493007 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGGCG GGGGAGCGCT GGAGCGGCTC GGGCGGCTCG GGCTGGTGGC GGTGGTGCGC GGCCGCTCGT GGGAGGACGC GGTAGAGGTC TCGGAGGCCC TCGCGGAGGG CGGGGTGGCC GCCATCGAGG TGGCCTACAC CACCCCCGGG GCTGGACGGG CCATCCGCGA GCTGGCCCGG CGGCGCGGGG ATGGAATCCT GCTGGGGGCG GGGACCCTGA CCTCGCCGGG GCAGGCGGAG GAGGCCGCGG AGAGCGGCGC CTCCTTTCTG GTGAGCCCCG GCTTCGACCC CGGCCTGGTG TCGGCCATGC TCCGGACGGG GCGCGCCGCG CTGCCCGGCG TGCTCACCCC CGGCGAGGTG ATGGGGGCGC TGAGGCTGGG GGTGGGGGCG CTCAAGCTCT TCCCCGCCGG GGCGGTGGGC CCCGGGTACC TGAGGGCCCT GCTCGGCCCC TTCCCCGGGG TGCGCTTTGT GCCGACCGGG GGCGTCTCCG AACGCAACGC GGGCGAGTGG TTCGGGGCCG GGGCGTTCGC CGTGGGGGCG GGGGGAGCGC TCGCCCCGCC CCGCCTGCGG GACGGGAGGC ACCGGGAGGA GGTCGTCGGG CTCGCGCGCC GGTTCGCCGC GGCCGTGGAG CGGGCCCGGG AGGGCGCGCG CCGGTGA
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Protein sequence | MDGGGALERL GRLGLVAVVR GRSWEDAVEV SEALAEGGVA AIEVAYTTPG AGRAIRELAR RRGDGILLGA GTLTSPGQAE EAAESGASFL VSPGFDPGLV SAMLRTGRAA LPGVLTPGEV MGALRLGVGA LKLFPAGAVG PGYLRALLGP FPGVRFVPTG GVSERNAGEW FGAGAFAVGA GGALAPPRLR DGRHREEVVG LARRFAAAVE RAREGARR
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