| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0070 |
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| Symbol | |
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| ID | 4117914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 71453 |
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| End bp | 74266 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638034864 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_642863 |
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| Protein GI | 108802926 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0383] Alpha-mannosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACCG CGAGGGAGAT CGCCGAGCGC AGCGAGGCGG GCCGGGAGCC ACTAAACATA
GTAGTCATAC CGCACTCCCA CTGGGACAGG GAGTGGTATG CGACCTTCGA GGAGTTCCGG
TTCTACCTGG TCCGCTTCAT GGACGAGCTG CTCGAGGTTC TTGAGAAGGA CGAGGCCTTC
CGGTCCTTTC TGCTCGACGG GCAGGTCTCG CTGCTCGAGG ACTACCTGCA GGTCAGGCCG
GAGAAGCTGG ACGAGCTGCG GCGGCTCGTG CAGGAGGGCC GGCTGGACAT CGGGCCGTGG
TACGTCCAGC CCGACGAGTT CCTCGTCTCC GGCGAGGCCC TGGTGCGGAA CCTCCTGATC
GGCGACCGGA TCGGCCGGCA GTTCGGCCCC GTGATGAAGC AGGGCTACGT GCCGGACACC
TTCGGGCACG TAAGCCAGCT GCCCCAGATC CTGCGGGGCT TCGGGATCGG CACCTTCTAC
TTCATGCGCG GGCTCGCCGA GAGCGTGGAC GAGCTGCGCA GCGAGTTCTG GTGGGAGGCG
CCCGACGGCT CAAGGGTGCT CGCCCACTTC CTCTCCGAGA CCTACTCCAA CGCCGCGGTG
CTCGGGCCGG ACCCCGAGAA GATCTCCTTC CGCCACGACC GCCTCGCCGA GCCCAGCAGC
TACTTCGTAA GCTACGACAG CCTCTACGAG CTCAGGGACC GGCTCGCCGC GCGGGCGGCC
GACAGGACCA TCCTGTTCAT GAACGGCAGC GACCACGTCA CCGTACAGCC GGACTTCTCC
CGCTACGTCT TCGCCCTCAA CCAGGCCATG GAGGACCGGC TCTTCAACGG GCGCCTGGCG
GACTTCGAGC GGCTGGTGCT GGAGGAGAAC CCGCCCCTCA AGACCTACCG GGGAGAGCTG
CGCTGGGCGC GCTACCAGCC CATCCTCAAG GGGGTCTACT CCTCCCGGAT GTACCTCAAG
CAGGAGAACG AGCGTACCCA GCAGCTGCTC GAGGGCCTGG CCGAGCGGGC GGCGGCCGTG
GTCTACGCCC TCGGGGGGCC GGACTACTCT CCCTTTCTGC GCTACGCCTG GAAGGAGCTG
CTCAAGAACC ACGCCCACGA CTCCATCGGC GGCTGCTCCG CCGACGCCGT CCACCGGCAG
ATGCTCGGGC GCTACGACAC CGTCCGGCGC GTCGGGCAGA AGGTGGTGGA CGAGGCCCTG
GACTACATAG CCTCCCGGGT GGCCCCCGAG CCCGACGCCG GCTCCATCCC CATCGTCGTC
TTCAACCCCA GCCCGTGGGA GCGGGGGGGC ACCGTGCAGG TCGAGGTCTC GCTCAACCTG
GACGCGCCCC TGAAGCGCCG GATCTTCGAC TGGATCGGCC AGAAGGAGTT CGACGTGGAG
CGGGCCGCGC TCCTGGACCC GGACGGCAGG GAGGTGCCCT TCTCCATACG GGGGCGGCGG
CTGCACATAG AGGACGCCCT CTACCGCCGC AAGGCCGTCC GCCGGGCCAC GGTGGAGTTT
CTGGCCGAGA AGATCCCGCC GCTCGGCTAC AAGGTCTACC GGCTCGTCGA GACGCCCGAG
CGGGAGCCGA CCTCCGAGGA GCGGGAGGTG CCCTGGGAGG TGGCCCTGGA GAACGAGCGC
CTCAAGGTGA CCGTCGAGGG CGACATGACG CTCACCATCC TGGACAAGAC CACCGGGGAG
CGCTACGCGG GGCTCAACCT CTTCGTGGAC GAGGCCGACG CCGGGGACGA GTACACCTTC
TGCCCGCCGC GCGAGCAGCG GCGGGTGCTC TCCTCGGAGG AGGACTGGCG GGTGGAGGAC
ACCGGCGACC CGCACACCCT GCTGCTCCGG GGGAGCATGC TGCTGCCCAA GGGCCTCGCC
CCGGGCCGGA GCGCCCGCTC CCTGCAGACG GTCCGCTGCC CGCTCAACGT CCGGCTCCGG
CTGCTGCCGG GGGCGCGGCG CCTGGAGATC TCCACCGAGT TCTTCAACCG GGCCAAGGAC
CACCGGCTGC GGGTGGTCTT CCCGGCGGGG TTCCCGGCCC GGGAGTCGGT CGCCGAGACC
GCCTTCGGCA CCGTCCGGCG CCCCACGCGC CCGACGGACA GCGCCGGCTG GCGCGAGAAG
GACACCGCCA CCTACGCCCA GCGGCGCTTC GTTTGCGTCG AGGACCCCGA GACCGGAAGG
GGGCTCGCGG TCCTCAACAA GGGGCTGCCG GAGTACGAGG TGACCCCGGA GGGGGAGGTG
TGCCTGACGC TCCTGCGCGG GGTGGGCTGG CTCTCACGCA ACGACCTCTC CACCCGCACC
GGCCACGCCG GGCCGGGGCT CGCCACCCCG GAGGCCCAGT GCTCCGGGCG GCACGTCTTC
GAGTACGCCG TCGTCCCGTA CACCGGCGGC CACCGGGAGG CGGGCATCTT CCGGGAGGCC
GAGGAGTACT GGCTGCCGCT GGAGGCCTGG GACGTCCACC GGGGCGAGCG GCCCCGGGAG
GGCTCGCCGG CCGGGGCCCC CGGCTCCTTC CTGCGGGTGC ACGGGAAAGA CGCCGTGCTG
AGCACGCTCA AGAAGGCCGC CGACCGGGAC GGCCTCGTCC TGCGCCTCTT CAACGCCTCG
GAGGAGGAGA GCCGGGCGGT GCTCAACTTC GGCATCCCCA TCGCCGCCGC CTACAGGACC
AACCTGAACG AGGAGATCCT GGAGGAGCTC GCCCCCAAGG GCCACCGGCT GAGGGTGAAC
CTCAGGCCCT GCGGCATCGA GACCGTGCTC GTCAAGCTGC ACAGGCCCGA AAGGTGGGCC
GAGAGGATCA GGCGGACCGC GCCGGAGCGG ACGAGAGGAA GGAGGACCGG ATGA
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| Protein sequence | MSTAREIAER SEAGREPLNI VVIPHSHWDR EWYATFEEFR FYLVRFMDEL LEVLEKDEAF
RSFLLDGQVS LLEDYLQVRP EKLDELRRLV QEGRLDIGPW YVQPDEFLVS GEALVRNLLI
GDRIGRQFGP VMKQGYVPDT FGHVSQLPQI LRGFGIGTFY FMRGLAESVD ELRSEFWWEA
PDGSRVLAHF LSETYSNAAV LGPDPEKISF RHDRLAEPSS YFVSYDSLYE LRDRLAARAA
DRTILFMNGS DHVTVQPDFS RYVFALNQAM EDRLFNGRLA DFERLVLEEN PPLKTYRGEL
RWARYQPILK GVYSSRMYLK QENERTQQLL EGLAERAAAV VYALGGPDYS PFLRYAWKEL
LKNHAHDSIG GCSADAVHRQ MLGRYDTVRR VGQKVVDEAL DYIASRVAPE PDAGSIPIVV
FNPSPWERGG TVQVEVSLNL DAPLKRRIFD WIGQKEFDVE RAALLDPDGR EVPFSIRGRR
LHIEDALYRR KAVRRATVEF LAEKIPPLGY KVYRLVETPE REPTSEEREV PWEVALENER
LKVTVEGDMT LTILDKTTGE RYAGLNLFVD EADAGDEYTF CPPREQRRVL SSEEDWRVED
TGDPHTLLLR GSMLLPKGLA PGRSARSLQT VRCPLNVRLR LLPGARRLEI STEFFNRAKD
HRLRVVFPAG FPARESVAET AFGTVRRPTR PTDSAGWREK DTATYAQRRF VCVEDPETGR
GLAVLNKGLP EYEVTPEGEV CLTLLRGVGW LSRNDLSTRT GHAGPGLATP EAQCSGRHVF
EYAVVPYTGG HREAGIFREA EEYWLPLEAW DVHRGERPRE GSPAGAPGSF LRVHGKDAVL
STLKKAADRD GLVLRLFNAS EEESRAVLNF GIPIAAAYRT NLNEEILEEL APKGHRLRVN
LRPCGIETVL VKLHRPERWA ERIRRTAPER TRGRRTG
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