| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0062 |
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| Symbol | |
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| ID | 4117906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 64030 |
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| End bp | 65340 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638034856 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_642855 |
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| Protein GI | 108802918 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGAGC GGAGGATCAG CCGTAGGGGG TTTCTCGGGC TCGGCGGCGG CGCGCTGGCC
GGGGCCGTGC TGCTGGGGGG GTGTGGTGGC GGAGGAGGAG GCAGCGGGGA GGTGCTCTTC
TCCTGGGGGC CGGATGACAC GGGGGTTCTG CCGAGGCTCA TAGAGCGGTT CAACCGGGAG
AACGGCTCCG GGATCACCGT CCGCTACCGG GAGATGCCCT CCGACACCGG CCAGTACTTC
GACCAGCTCA GGACCCAGTT CCAGGCCGGC GGGGGGGACA TCGACGTCAT CGGGGGGGAT
GTGATCTGGC CGGCCCAGTT CGCGGCGAAC GGCTGGATCG TGGACCTCTC CGACCGGTTC
GAGGACGCCG GCCGGTTCCT CGAAGGGCCC ATGCAGGCGA TGACCTACGA GGGCAAGGTC
TACGGCGTCC CCTGGTACAC CGACGCCGGG CTGCTCTACT ACCGCAAAGA CCTCCTGGAG
AAGAGCGGGT ACTCGGAGCC GCCCAGAACC TGGGACGAGC TCAGGGAGAT GGCCCTGCGC
GTCAAGCAGG ACTCCGGGGT TCCCGCGGGC TTCGTCTTCC AGGGCGCCGA GTACGAGGGT
GGGGTGTGCG ACGGGCTCGA GTACATCTGG ACGCACGGGG GGGACGTGCT GGACCCGGAG
GACCCCACGA AGGTCCTCAT AGACAGCCCC GAGTCGGTGG CGGGGCTGAA GACCGAGCGG
AGCATGGTGG AGGAAGGGGT GGCGCCCGAG GCCGTCACCA CCTACAAGGA GGACGAGTCG
CACGGGGCCT TTCTCAGGGG CGACGCCGTC TTTCTGCGCA ACTGGCCCTA CGTCTACGCC
CTCGTGGGCG ACCCCGAGCA GTCCCGGATA GAGCCGGGCC AGGTTGGGAT CTCCGAGCTC
CCCGTGGGCG GCGAGGGGCA GCAGAGCTAC AGCTGCCTCG GGGGCTGGAA CTTCTTCATC
AACGCCTCCT CGGGGCGGCA GGAGGAGGCC TGGGAGTTCA TCCGGTGGAT GACGGAGCCC
GAGCAGCTCA AGGTCAACGC CCTGCAGGGC TCCCGGCTCC CGACGCGGCG CGGCCTCTAC
GAGGACCGGG AGGTGCTGGA GAAGGTCCCG GTCGCCAGGC TCGGCAAGGA GGCCATCATC
CAGAACTCCC GCCCGCGCCC GGTCTCGCCG TACTACTCGG ACATGTCGCT CAGAATGGCC
GAGCAGTTCA GCGCCTCCCT CAAGGGCGAG GTCTCCCCCG AGCAGGCCGT AAAGACCCTG
CAGGGCGAGC TGCAGCGCCT CATCGAGGAG GGCGAGGCGG CCACCGGCTA G
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| Protein sequence | MGERRISRRG FLGLGGGALA GAVLLGGCGG GGGGSGEVLF SWGPDDTGVL PRLIERFNRE
NGSGITVRYR EMPSDTGQYF DQLRTQFQAG GGDIDVIGGD VIWPAQFAAN GWIVDLSDRF
EDAGRFLEGP MQAMTYEGKV YGVPWYTDAG LLYYRKDLLE KSGYSEPPRT WDELREMALR
VKQDSGVPAG FVFQGAEYEG GVCDGLEYIW THGGDVLDPE DPTKVLIDSP ESVAGLKTER
SMVEEGVAPE AVTTYKEDES HGAFLRGDAV FLRNWPYVYA LVGDPEQSRI EPGQVGISEL
PVGGEGQQSY SCLGGWNFFI NASSGRQEEA WEFIRWMTEP EQLKVNALQG SRLPTRRGLY
EDREVLEKVP VARLGKEAII QNSRPRPVSP YYSDMSLRMA EQFSASLKGE VSPEQAVKTL
QGELQRLIEE GEAATG
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