| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0055 |
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| Symbol | |
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| ID | 4117744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 56429 |
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| End bp | 57478 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638034849 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_642848 |
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| Protein GI | 108802911 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCAGC AGCGAGGAAA GGTGCTCATA ACCGGAGGGG CGGGGTTTTT GGGCATAAAT
TTGGCCCGGC ACCTGCTGAA GAAGGGCTAC GCGGTGGCCT CGCTGGACAT CGCGGAGTTC
GACTACCCCG AGCGGGACAG GGTCGAGGTG ATAAGGGGCG ACATCCGCGA CGCGGCGCTC
GTGGAGCGGG CGGTCCGGGA GGCGGACTTC GTGGTGCACG CGGCGGCGGC GCTGCCGCTG
TACAAGCCGG AGGACATCTA CACCACGGAC GTGGAGGGCA CCCGCAACGT GCTGGAGGCG
GCCCTGCGGC ACGGGGTCCG GCGGGTGGTG CACATCTCCT CCACGGCGGT CTACGGCATC
CCGGACCACC ACCCCATCTA CGAGACCGAC CGGCTGGAGG GGGTGGGCCC CTACGGGCAG
GCCAAGATCC AGGCGGAGAT GATCTGCCTG GAGTACCGGG CGAAGGGGCT GGTGGTCCCG
ATCCTGCGCC CCAAGTCGTT CGTGGGGCCG GAGCGCCTCG GGGTCTTCGC CCTGCTCTAC
GACTGGGCCC ACACCGGGCA CAACTTCCCC GTGCTGGGCA GCGGGAACAA CCGCTACCAG
CTGCTGGACG TGGAGGACCT CTGCGAGGCG ATAGAGCTGT GCCTGAGGCT GCCCGAGGAG
CGGGTGAACG ACACCTTCAA CATCGGGGCG AAGGAGTTCT CCACCATAAA GGAGGACTAC
CAGGCGGTGT TGGACGCCGC CGGGCACGGC AAGCGGGTGA TCGGCTTCCC GGCGGCCCCG
GCGATCTGGG CGCTGCGCAT CCTGGACCGC CTAGGCCTCT CCCCCCTCTA CAAGTGGGTC
TACGAGACGG TCTCGAAGGA CTCCTACGTC TCCATAGAGA AGGCGGAGCG GCAGCTGGGC
TTCACCCCGA GGTACTCGAA CAGGGAGGCG CTGCTGAGGA ACTTCCGGTG GTACCTGGAG
AACCTGGACC GGTTCCAGGA CGCCTCGGGG GTCTCCCACC GGGTGCCGTG GAAGCAGGGG
GCCATAGGGT TGCTGAAGAA GGTGTTCTGA
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| Protein sequence | MEQQRGKVLI TGGAGFLGIN LARHLLKKGY AVASLDIAEF DYPERDRVEV IRGDIRDAAL
VERAVREADF VVHAAAALPL YKPEDIYTTD VEGTRNVLEA ALRHGVRRVV HISSTAVYGI
PDHHPIYETD RLEGVGPYGQ AKIQAEMICL EYRAKGLVVP ILRPKSFVGP ERLGVFALLY
DWAHTGHNFP VLGSGNNRYQ LLDVEDLCEA IELCLRLPEE RVNDTFNIGA KEFSTIKEDY
QAVLDAAGHG KRVIGFPAAP AIWALRILDR LGLSPLYKWV YETVSKDSYV SIEKAERQLG
FTPRYSNREA LLRNFRWYLE NLDRFQDASG VSHRVPWKQG AIGLLKKVF
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