| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0033 |
|---|
| Symbol | |
|---|
| ID | 4117858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 34412 |
|---|
| End bp | 35284 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 638034827 |
|---|
| Product | alpha/beta hydrolase fold |
|---|
| Protein accession | YP_642826 |
|---|
| Protein GI | 108802889 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGTCC GGGAGCTGCA CCTGCGGGCG GGCGGGGTTG GGGTCCGCTG TCTGGCGGCC
GGGGAGGGGG AGCCCGCCGC GGTGCTGCTG CACGGGGCGA GCCTGGACTG CGCCGACCTC
TCCTTCGGGC ACCTCATCGG GCCGCTCTCG GGGCGCCGCC GGGTCTACGC CCCCGACTGG
CCGGGCTACG GCGGGAGCGA GCGCCCGCCG GAGGCGGCCT ACGACCTGGC CTACTACGAG
AGGTTTCTGG AGCGGCTGCT GGACGCCCTG GGCCTCGAGC GCGCCGACCT CGTGGGCCTC
TCCCTCGGCG GGGGGGTAGC CCTCTCCCTG GCGCTGCGCG AGCCCCGCCG GGTGCGGCGG
CTGGTGCTCG CGGGGAGCTA CGGCCTGGGA CGCCGGGTGC CCTGGGGGCC GCTCGGCGCG
GCGCTCGGGC GCTCGGCGCT GGCGGCGCGC CTGGCCTACG GCCTCATGCG CCGCAGCCGC
CCCGCCCTCC GGCTCGGGCT GCGCAACGTG GTCTGCGACC CGGCGGCGGT GACGGAGGAG
CTCCTGGAGG AGCTGGCCCG CCAGGCCGCC CTCCCCGGCG CGGGGAGGGC CTTTCTCGCC
TTCCGCCGAA GCGAGGTGGG CTGGAGGGGG CTGAGGTCCG ACCTCTCCGG CGACCTCCAC
CGGCTCGCGG TCCCGACGCT CCTCGTGCAC GGCTCCCGCG ACAGAATCGT ACCGGCGGGC
TGGGCGGTCG AGGCGCACCG GCGCATCCCG CGCTCCGAGC TCCTCATCCT CGAGGGCTGC
GGGCACTGGG TGCCCAGGGA GCGGCCGGAG GAGTTCAGCC GGGCGGTCGA GAGGTTTCTG
TCGCGGCCCG ACCCAGCAGG GCGTCCACGC TGA
|
|---|
| Protein sequence | MSVRELHLRA GGVGVRCLAA GEGEPAAVLL HGASLDCADL SFGHLIGPLS GRRRVYAPDW
PGYGGSERPP EAAYDLAYYE RFLERLLDAL GLERADLVGL SLGGGVALSL ALREPRRVRR
LVLAGSYGLG RRVPWGPLGA ALGRSALAAR LAYGLMRRSR PALRLGLRNV VCDPAAVTEE
LLEELARQAA LPGAGRAFLA FRRSEVGWRG LRSDLSGDLH RLAVPTLLVH GSRDRIVPAG
WAVEAHRRIP RSELLILEGC GHWVPRERPE EFSRAVERFL SRPDPAGRPR
|
|---|
| |