Gene Rxyl_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0003 
Symbol 
ID4115662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2980 
End bp3174 
Gene Length195 bp 
Protein Length64 aa 
Translation table11 
GC content72% 
IMG OID638034795 
ProductRNA-binding S4 
Protein accessionYP_642796 
Protein GI108802859 
COG category[S] Function unknown 
COG ID[COG2501] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000218407 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTCC CGGCCGGCAT AACGCTCGGC CAGGCCCTCA AGCTGGCGAG GGTCGTGGGC 
TCCGGCGGCG AGGCGAAGCT CGTGATACGG GCCGGAGAGG TGCGGGTGAA CGGTGAGGTG
GAGACGCGCC GCGGCCGCAG GCTGCGCGCG GGCGACGTCG TGGAGGTGGG GGGAGAGCGT
CTGGAGGCCT CTTGA
 
Protein sequence
MKVPAGITLG QALKLARVVG SGGEAKLVIR AGEVRVNGEV ETRRGRRLRA GDVVEVGGER 
LEAS