Gene Mmcs_5556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5556 
Symbol 
ID4114424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008147 
Strand
Start bp129020 
End bp130534 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content68% 
IMG OID638034711 
Producthypothetical protein 
Protein accessionYP_642712 
Protein GI108802516 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC CGCTGCAGCC GCGCCGCGGA TTCCGTTCCA AGAGTTCCGA GCCCGGCCCC 
AACGCCGCGC GCAGCCGGCC GTGGGGATTC GTCACCAAAC ACCAAGTGTC GGGGTGGCGG
TTCCTCATTC GGCGGATCAG CAACGGCGTC GCCCTGCGTG ACACCCGCAT GCTCACCGAC
CCGCTGCGTC GGCAGGGCCG TGCCTTGAGT ATCGGCGTGA TGCTCGGCGT GGTGCTGCTC
GGCGGGGCGT TCATTCTGTC GATCTTGCGG CCTGCCGGAC TGGCGGGAAA TCGGCCCGTG
TTGGCCGACC GCTCCACCAA CGCGCTCTAC GTCATGGTCA ACGATCAACT GCACCCGGTC
CTCAACTTGG CCAGCGCGCG ACTCATTGTC GGCAAACCGG AAGAGCCCAG CCTGGTGAAG
TCCGATGAGA TCGACAAACT GCCGCTCGGC AACACCCTGG GCATTCCCAA CGCCCCATCG
AGGATGGTGC AAAACCCGAC TCGGGACGCC AAGTGGATGG TCTGCGATGC CGTCGGCGGG
CCCGACGCCG GCACGACGGT GATCGCCGGA GATCCGGTCG GTGGTTCCGG GCACGCCACG
CCGTTGCCAG CCTCGTCGGC AATCCTGGCC ACGAGCGACG GTGGTGAGAC CAACTGGCTG
ATCTGGGGCA ACAAGCGCAG TGAGATCGAC TTGGAGAACG CCGCGGTCAC CGCCGCGGTC
GGCATCAACG TCGACACCCC GGCGCCCCGC AGCATCGACC GGTCGTTGCT GAATCTGATT
CCCGAATCAC CACCGCTGGT CGTGCCGTTC CTGGCCAACG CCGGCGATCC GCCGCGTTTC
GTCTGGCCGG TTCGCGGGGA GCAACCGCCC GCAATCGGCG CCGTGGTCGT CGACCGCGAT
CAGGACAACG CCCTGCGCTA CTACGCGGTC ACCGCCGACG GCTTGCAACC CATCTCACCT
GTCATCGCCG GGATCCTGCG CGCCAACGAC GCCTACGGTC TGGTCGAGCC GCCCGCCCTA
ACTCCCGACC AGGTGGCCAA AGCTCCGAAG TCGGAAGCGA TCCCAGTCGA CAACTACCCC
GAACAACCCC TCGACGTGCT CGACCCAAGT ACCGAGCCGG TGTCGTGCGG CCAGTGGACC
AAGCTCGACG GCGCACCGAC CTCCCAGCTG ACGCTGCTGG CCGGCCAGAG CTTGCCCGTG
GCCGACGACG CTACGCCGGT GTCGCTGCTG GGCGCGGGCG CCACCACCGC ACAGCGGGCC
ATCCTGCCCC GCGGCAGCGG CTACTTCGTT CAAGTGACCG GTCAGCAGCC CGACTCGGCG
ACCAAGGAAT CGGTGTTCTG GGTGTCCGAC CTGGGCGTCC GCTACGGCAT GGAAGCCCAA
GGCGAGGGGC AGACCGCCAG CCCGGCCGAG TCGCTCGGCA TGACCGCCGA GCCGCTGCCG
ATTCCCTGGT CAGTTCTGAG CTTGTTCGCC CCTGGCCCCA CATTGTCCAA AGCCGACGCG
CTGGTGGCGC ACTAA
 
Protein sequence
MTTPLQPRRG FRSKSSEPGP NAARSRPWGF VTKHQVSGWR FLIRRISNGV ALRDTRMLTD 
PLRRQGRALS IGVMLGVVLL GGAFILSILR PAGLAGNRPV LADRSTNALY VMVNDQLHPV
LNLASARLIV GKPEEPSLVK SDEIDKLPLG NTLGIPNAPS RMVQNPTRDA KWMVCDAVGG
PDAGTTVIAG DPVGGSGHAT PLPASSAILA TSDGGETNWL IWGNKRSEID LENAAVTAAV
GINVDTPAPR SIDRSLLNLI PESPPLVVPF LANAGDPPRF VWPVRGEQPP AIGAVVVDRD
QDNALRYYAV TADGLQPISP VIAGILRAND AYGLVEPPAL TPDQVAKAPK SEAIPVDNYP
EQPLDVLDPS TEPVSCGQWT KLDGAPTSQL TLLAGQSLPV ADDATPVSLL GAGATTAQRA
ILPRGSGYFV QVTGQQPDSA TKESVFWVSD LGVRYGMEAQ GEGQTASPAE SLGMTAEPLP
IPWSVLSLFA PGPTLSKADA LVAH