| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5528 |
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| Symbol | |
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| ID | 4114396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008147 |
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| Strand | - |
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| Start bp | 99381 |
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| End bp | 100370 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638034683 |
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| Product | DNA ligase (ATP) |
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| Protein accession | YP_642684 |
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| Protein GI | 108802488 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR02779] DNA polymerase LigD, ligase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 0.418116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.413759 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCAGCA GGTCCAAGCT CTCTGTGCGC GACCCCGCGT TCGCGCCGAT GCTGGCCACC
CTGGGCGCCG CACCCTCCGG CGCCGCCCAT GCCACCGAGT GGAAATTTGA CGGGCAGCGC
GCGACCGTCG TCGTCGAGCA CGGCGCGGTG GTGGTGTTCA CCCGCAACGG GATGGAAGTG
ACTCGAACCT TCCCTGAACT TCAGTCGATC GCCGCGGCGG TCGGCGATCG CCGCATGGTG
CTCGACGGCG AAATCGTGGC CCTCGACACC GAAGGCCGGC CGTCGTTCAC CCGGCTGCAG
CGCCGTTGGC CCCAGCAGCG CCGACCCAGC GCCGAGCTGC TCCGCGAGGT GCCCTGCCGC
GTGATGGCCT TCGACGTCCT GCGGCTCGAC GGCCGCGACA CCACCGCACT GCCCTACATC
GAGCGCCGCG AGCTGCTCGA CGACGTGATG GTGGCCAAGT CGCGTGTCCT GACCGTGCCG
GCCGCCCTGC ACGACGTGGA CCCCGCAGAC GCACTCGAGG CGGCCGCGCT GCACGGCATG
GAAGGCATCG TGGTCAAGAG GCTCGACTCG CCGTACCGGC CCGGGCAGCG CAGCCCCGAC
TGGACGAAAG TCCCGGTCCG CGCCACCTGC GAGCTGCTGA TCGCCGGCTA TTGGTGTGCC
GGCGGCCCGG GCGGACGCAG CTGTGTGGGC TCGCTGCTGG TGGCCGGCTA CAACCCCGAC
GGCGACCTGG TAGCCATTGG CCAGGTCGGC ACCGGGTTCA GCGCCACCAC CCGCCGGCGG
CTGTTCGACC AGCTGCAGCC GATCCGGCGC ACCACCTCAC CCGTCGCCAA CCGGGTCGAG
CTGTCCGGCG TGCGGTTCGT GGAACCGTGC TACGTCGCCG AGATCGCCTA CCGCGAATAC
GTTCCGGGCC GCTGGCTGCG GCACGCCTCA TTCAAGGGTT GCCGCGAGGT GGCGGACCTC
TCGCAGATTC AGATCCCGAA CTGCGCATAG
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| Protein sequence | MPSRSKLSVR DPAFAPMLAT LGAAPSGAAH ATEWKFDGQR ATVVVEHGAV VVFTRNGMEV
TRTFPELQSI AAAVGDRRMV LDGEIVALDT EGRPSFTRLQ RRWPQQRRPS AELLREVPCR
VMAFDVLRLD GRDTTALPYI ERRELLDDVM VAKSRVLTVP AALHDVDPAD ALEAAALHGM
EGIVVKRLDS PYRPGQRSPD WTKVPVRATC ELLIAGYWCA GGPGGRSCVG SLLVAGYNPD
GDLVAIGQVG TGFSATTRRR LFDQLQPIRR TTSPVANRVE LSGVRFVEPC YVAEIAYREY
VPGRWLRHAS FKGCREVADL SQIQIPNCA
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