Gene Mmcs_5502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5502 
Symbol 
ID4114370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008147 
Strand
Start bp78427 
End bp78846 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content69% 
IMG OID638034657 
ProductPilT protein-like protein 
Protein accessionYP_642658 
Protein GI108802462 
COG category[S] Function unknown 
COG ID[COG3742] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones84 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.835237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCATCG ACACCAGCGC CGTCCTCGCG CTGATTCAGC GCGAGGACCC GCACGCCGAA 
CACGTCGCCG CCGCACTAGC CGGCGACCGC AACCCCGTCA TGGCCGCCCC GAACGTCGTG
GAATGCCTCA TTGTCCTCAC CAGCCGCCAC GGCCCGATCG CCCGCACCGT CTTCGACCGC
CTCAGCAGCG AAATCAACCT CGGCGTAGCG CAATTCACCA CCGAGCACGC CGCCGCCGCG
CACCGCGCCT ACAGCCAGTA CGGCAGAGGG CGCCACCCCG CCGCACTCAG CTTCGGCGAC
ACCATGGCCT ACGCGGCAGC CAAACTGGCG CACGAGCCGC TCATCGCCGT CGGCGGTGAC
TTCGCCCGAA CCGACCTCGA GTTCGATGGG GTGATCGGCT ACTGGCCCAG CCCGCCATGA
 
Protein sequence
MIIDTSAVLA LIQREDPHAE HVAAALAGDR NPVMAAPNVV ECLIVLTSRH GPIARTVFDR 
LSSEINLGVA QFTTEHAAAA HRAYSQYGRG RHPAALSFGD TMAYAAAKLA HEPLIAVGGD
FARTDLEFDG VIGYWPSPP