Gene Mmcs_5488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5488 
Symbol 
ID4114356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008147 
Strand
Start bp60506 
End bp62269 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content69% 
IMG OID638034643 
Producthypothetical protein 
Protein accessionYP_642644 
Protein GI108802448 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.438418 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACCC TCAGCGAGGG CATCGACTCC ACACACTGGT GGAAGCACAT CTGCACCCGC 
ACCGACGTCG CGATCGGCGA GCTGGTCGAC GGATTCGCCG AAATCGCCGA CCAGGCCATC
CCCTACGCCT GGCTGCCCGG CCGGGCGCGA ACCTTCTACG GCACTGACTT CAGCACCTGG
TCAGATCTGG CCGGCGAGAC CATCGACACC CTGGTCAACC GCCCCAAGGG CGGTATCGGC
ACGGTACGCG CGATCGTCAT TGCCGCCCAC GAAGCTGTCG CCACAGCTCG CGCCACCCGA
GATGACGAAC CCCTCGACGC CGCCACCACG ATCAGCAGGC TGCTCGACCG ACTCACCGCC
TATGACCACG GCCTTCTCTC GGCACGTGTC TGGGCCCTGA ATCCGCTGAC CATCCCGGTC
ACAGCCCACC AGCTCGGCGC GACTCAGGTC AACGTGCAGC GCGCCACCCC GCGGGCCTAC
CGCCGCCTGC AGGACCTGCT CGCCGACCCC GCACATGCCG CCGTCGGCGA CTACGCCGAG
CAGCTGCGCC ACCGCCTGGG CCCGCTAACC CGAGAACACA CCGCCGCACG CGCCCTTCGC
GATCTCGGCC TGGACCTGAC TGGGGATGCC GGCCAACTGC TGCTGCACGT CGCCGGCCCC
TACACCCGCC GAGGCACCTG GCTTGAACAG GCCGACACCG ACACGCTGCG CACCGCCGCC
GAACGCCTCG ACGAGACGGT GAGCCGCCTC GGGGCACCCG CGACCGCGGC GCTGACTGAA
GAACTCACGG CGCTCGGCAT CCACACCGAC ACCGCCGCCG ACGTCATTGC CCACCATGAC
GGGCTGCGAC GCTTCGGCGA CCGCTGGGTG CGCTGGGGCG ACACCATCGC CGACAAGATC
GAAGCCGCGC TGCACCTGTC CGGCGTCCCC GCCTCGGCGC CACTAATTGC GGCCACCATC
GACTGTCACG AGAAGTCGGT CCGCGTCGCG CTCTGGGATG ACCCGCGCTT CCACCGTGCC
ACCAAGCAGA CTTGGGCACT GCACCGGTGG AACATCGACG AGTACCACGG CGTGTTCTCC
GAGATAGCTG CCCGCATCGA CGCCGCCGGC GGGGCGGTCA ACATCCAAGC CCTCGTCGAC
GACATCACGA CCACGTTCCC CGACGTCGCC GAGAGTTCCG TCCGCACCTA CATGAGCGCG
CCGGGCTTCA TCACCGACAG CGGCATGGTG CGCCGCCGCA CCAAGCGCGA CGGCTGGCCG
GCGGTGCTGC CGCTCAACGC CATTCGCGGG GCATTTCACA ACGGCGGCAA AGAGATTCGC
ATCGCACTGC CTGTCACCTT CGACACGCTG CGCGGATCCG GGCAATCTGT GCACCCGGGG
ATAGCCACCG CATTAGGTAT CCATCCCGGT GAGCAACGAA CGTTCACCGG GAAAGCCGGC
GACATCACCG TGTTCTGGAG ACTGGCCGCG ACCAGCGGCG GCAGCGTCGG ATCGCTGCGC
GGCCTGGCCA CCAGCCTCGG CGCCGAACTC GGCGACACCC TCGTGCTGGC CTTCAACATC
CACCACGGCA CTGTCCGCGC GATCCGGATC CCCGCCAACG AACATCCGCC CCAACGGCTG
CGGGCATTGC TCGGTAAGCC GGTCCGCAAC CCTCACGCAG ACCTCGCCCG CAGCCTGCGG
TGTCGCCCCG AAGACCTCAT CGCACTGCTG CGCCGCCGCG GCGACGACGA CCTCATCGAG
CTGATCGACA CGGTGCAGCT GTAA
 
Protein sequence
MTTLSEGIDS THWWKHICTR TDVAIGELVD GFAEIADQAI PYAWLPGRAR TFYGTDFSTW 
SDLAGETIDT LVNRPKGGIG TVRAIVIAAH EAVATARATR DDEPLDAATT ISRLLDRLTA
YDHGLLSARV WALNPLTIPV TAHQLGATQV NVQRATPRAY RRLQDLLADP AHAAVGDYAE
QLRHRLGPLT REHTAARALR DLGLDLTGDA GQLLLHVAGP YTRRGTWLEQ ADTDTLRTAA
ERLDETVSRL GAPATAALTE ELTALGIHTD TAADVIAHHD GLRRFGDRWV RWGDTIADKI
EAALHLSGVP ASAPLIAATI DCHEKSVRVA LWDDPRFHRA TKQTWALHRW NIDEYHGVFS
EIAARIDAAG GAVNIQALVD DITTTFPDVA ESSVRTYMSA PGFITDSGMV RRRTKRDGWP
AVLPLNAIRG AFHNGGKEIR IALPVTFDTL RGSGQSVHPG IATALGIHPG EQRTFTGKAG
DITVFWRLAA TSGGSVGSLR GLATSLGAEL GDTLVLAFNI HHGTVRAIRI PANEHPPQRL
RALLGKPVRN PHADLARSLR CRPEDLIALL RRRGDDDLIE LIDTVQL