Gene Mmcs_5461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5461 
Symbol 
ID4114329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008147 
Strand
Start bp41391 
End bp42602 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content64% 
IMG OID638034616 
Productmajor facilitator transporter 
Protein accessionYP_642617 
Protein GI108802421 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCAACC CAGCTGTTAA TCTCCGGGCC ACCTCCCTGC TGTGCAGCGT GGCTCCCAAC 
GTCGAAACGC TGATCGGCGC CCGCTTCCTG CAGGCGATCG GCGGTTCGAT GCTCACTCCT
GCTGGGTTGT CGATCGTCAC GCAGGTGTTC ACCGGCAGAG TGGAGCGCGC GCGCGTCATC
GGCATATGGG GGGGCGTCGT AGGCATCTCG ATGGCCTTGG GTCCGATCAT GGGCGGAATA
CTTCTCGAGT ATGTTGACTG GCGAGCAGTG TTCTGGATCA ACGTGCCGAT CTGCGCGCTT
GCGGTGCTGT TGACCGCGAT CTTCGTTCCC GAATCCAAGT CGGTCACCAT GCGCCACGTC
GACCTGATCG GCTTGGTCCT GGGCATGGTC TTCCTGTTCG GGCTGGTGTT CGTGCTCATC
GAAGGGCCAG GGATGGGCTG GGCCGACACC CGCGTCGTCG TTAGCTGTTG CCTCGCAGCG
CTGGCCTTCG CGACATTCCT GCGCTACGAG TCACGCCGCG TCGACCCGTT CGTCGAGCTC
CGATTCTTCC GCAGCATCCC GTTTGCTTCG GCGACGGCCA TCGCGGTGTG CGCATTCGCT
GCATGGGGCG CGTTCCTGTT CATGATGTCA ATCTATTTGC AAGGGGAGCG CGGGCTTTCA
GCGGTGAACA CCGGGCTGAT GTTTCTGCCC GTGGCCGTCG GCGCATTCAT CTTCTCGCCC
TTGTCTGGCC GGCTGGTGGG GCGATTTGGT GCCAGACCGT CGCTGATGAT CGCCGGCGCA
TTGATCGTCG CCGCGACTCT CATGTTCGCG CAGATGAGCG ACGCTACCCC GCAATGGCGA
ATGCTGGTCG CCTTTGCGGT TTTCGGCGTC GGTACTTCGA TGGTGAACGC ACCGGTCACA
ACCGCGGCCG TCAGCGGTAT GCCGACCGAC CGCGCCGGTG CGGCGGCGGC TATCACATCC
ACGAGCCGAC AGGTGGGCGT CGCCATCGGT GTGGCCATAT GTGGCCCGGT CGCTGGTGCG
GCATTGGGCG ACACCAACGT CGATTTCGCG GTCTCCGCCC AGCCCCTATG GCTAGTGTTC
GCTGGAGTTG GTGTGCTGAT CTTCACGCTC GGTGTCTACT CGACGTCGAA GCGCGCGCTG
CGCTCAGCAG AGCATCTGGC GCCGCTGATC GCAGGAACCG ATCCGCGACG GGAGGCTGCC
GATGTCGCGT AA
 
Protein sequence
MSNPAVNLRA TSLLCSVAPN VETLIGARFL QAIGGSMLTP AGLSIVTQVF TGRVERARVI 
GIWGGVVGIS MALGPIMGGI LLEYVDWRAV FWINVPICAL AVLLTAIFVP ESKSVTMRHV
DLIGLVLGMV FLFGLVFVLI EGPGMGWADT RVVVSCCLAA LAFATFLRYE SRRVDPFVEL
RFFRSIPFAS ATAIAVCAFA AWGAFLFMMS IYLQGERGLS AVNTGLMFLP VAVGAFIFSP
LSGRLVGRFG ARPSLMIAGA LIVAATLMFA QMSDATPQWR MLVAFAVFGV GTSMVNAPVT
TAAVSGMPTD RAGAAAAITS TSRQVGVAIG VAICGPVAGA ALGDTNVDFA VSAQPLWLVF
AGVGVLIFTL GVYSTSKRAL RSAEHLAPLI AGTDPRREAA DVA