| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5454 |
|---|
| Symbol | |
|---|
| ID | 4114539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008147 |
|---|
| Strand | - |
|---|
| Start bp | 33646 |
|---|
| End bp | 34812 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638034609 |
|---|
| Product | putative nonspecific lipid-transfer protein |
|---|
| Protein accession | YP_642610 |
|---|
| Protein GI | 108802414 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 0.839799 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGTTCGC TGCGCGACAA GGCCTGCATC GTCGGCGTTG GTCATACGGC CTACCGTCGT
GATGGCACTG AGTCGGCAAC GGACCTTGGC CTGCAACTCG AAGCGGCCCA TGCTGCGATC
GTGGATGCCG GGCTGTCGGC TGGCGAGATC GACGGCCTCA TCTGCCCGAT CAACGGTGGC
ACGGCCGAAG ATTTCATCGC GAATCTCGGC CTGACGCATG TTCGTTACGC GGTGACGTCC
CATACCGGAG GCGCGGCAAG TGTGGCGGCC CTGGCAACTG CGGCGATGGC GGTTTGGTCG
GGCGTCGCGC GGCATGTCCT CATTCCCGCG GGCTGGTGTG GGTACTCAGG TCCGCGTGCC
CGCGGGATGG CATCGAGCGC GGACATGGCG ATAGGCAAGG TTGTCCGGGA TTATTACGCG
CCACAGGGCG CGGTGTCGGC GGTGCACCAG TATGCGCTCG TGGCCGACCG CTACGTCCGC
AAGTATGACG TGCCGCCTGA AGCGATGGGG GCGGTGGCAG TTGCGTTTCG TGCTAACGCG
CAGCTCAACT CGAATGCGGT GATGTGCGGC CGTGAGTTGA CGATGCAGGA CTACCTCGAC
GCTCCACCGA TCAGTTCGCC GTTGAGTTTG TTCGATTGCA GTTTGGAGAC CGACGGCGCA
GCAGCGGTGG TGGTATCAGG GGCCGATCGT GCGGCTGACG GCCCGCACCG GCCGGTGTTT
GTGATGAGTG TGGCCGAAGG TCGCCCATTT CCCGTCGACG AATTCGCCAA CAGGGCCGAT
CCATTGGAGA TCGGGCTTGC CGAGGCGGCG CCGCGCGCGT TTGCCGACGC TGGTGTCGCC
CCGTCTGATA TCGATCTGCT CGAGGTTTAC GACAGTTTCA CTGTCAACGT GTTGCGGCAG
ATCGAAGCGG CCGGATTCTG CAAGGCGGGC GAAGCAGCGG ATTTCGTTCT CGACGGGTGT
ATCGCCGCGG ACGGTTCGTT GCCCACGAAT CTCAACGGCG GTTTGTTATC CGAAGCCCAC
GTGCAAGGCA TGAACAATCT GGTCGAGGCG GTGCGGCAGC TGCGCGGTGG TTTACCGCAG
CGGCAGGTCC ACAATGCGGA GTTGGCGGTA GTGACCGGTA TGGGCGGCGG ATGGGGTTCA
GGTGCTCTCG CGATATTGCG TCGGTGA
|
|---|
| Protein sequence | MSSLRDKACI VGVGHTAYRR DGTESATDLG LQLEAAHAAI VDAGLSAGEI DGLICPINGG
TAEDFIANLG LTHVRYAVTS HTGGAASVAA LATAAMAVWS GVARHVLIPA GWCGYSGPRA
RGMASSADMA IGKVVRDYYA PQGAVSAVHQ YALVADRYVR KYDVPPEAMG AVAVAFRANA
QLNSNAVMCG RELTMQDYLD APPISSPLSL FDCSLETDGA AAVVVSGADR AADGPHRPVF
VMSVAEGRPF PVDEFANRAD PLEIGLAEAA PRAFADAGVA PSDIDLLEVY DSFTVNVLRQ
IEAAGFCKAG EAADFVLDGC IAADGSLPTN LNGGLLSEAH VQGMNNLVEA VRQLRGGLPQ
RQVHNAELAV VTGMGGGWGS GALAILRR
|
|---|
| |