Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_5450 |
Symbol | |
ID | 4114535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008147 |
Strand | - |
Start bp | 30227 |
End bp | 31642 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 638034605 |
Product | ring hydroxylating dioxygenase, alpha subunit |
Protein accession | YP_642606 |
Protein GI | 108802410 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTAA AAATGAGTAC TTCAGGCGGT TCGGACACGA CCGCTCGTAG TCTCGTCGAT GTCGATCGCG GGGAGATCAG TCGCGAAATC TTCACCGATG CTTCGATTTT CAACCGTGAG TTGGAGTATT TGTTTCCGCG GAGCTGGTTG TTTGTGGGTC ATGCCTCGCA GGTGTCTGCG CCGGGTCAGT TCTTCTCGTC GAGGATGGGC TCGGATCCGG TGTTGTTGAC CCGTGACGCT CAGGGTGGTG TGAATGTCTT GCTCAATTCG TGCCGACATC GGGGTATGGC GGTGTGTCGC TATGACGAGG GCCGTACGCT GCAGTTCACC TGTCCCTATC ATGGCTGGTC GTACTCGATG GACGGTTCGC TGGTGTCCAC TCCAGGGGAT TTGCACGGTG TGCCGCAGCA GGGCATGGCC TACGGCAACG GCCTTGACAA AGCGGCCTGG GGACTTGTCA GGGCTGCCAA GGTGCACAAT TACAAGGGCC TGGTATTCGC GTGCTGGGAT CCATCAGCCC CGGAGTTCGA TGAATACGTT GGGGACTTTC ATCATTGGCT GGATAACCTG TCTGATGCTT TTGATGGTAC GGAAGGTGGT ACCGAGGTGT TCCGTGGGGT GCAGAAGTGG CGCATCAAAT CAAATTGGAA ATTCGTCTCA GAGAATTTCT TGGGCGATAC CTATCACGGG GCGACGACCC ATGCCTCGGT TGAACAGGTG GGCATCGGGC CGGGTGGCAG AAATTCACGA CGTCACGGTG AACGACAGGA TCAGGGTGGT TTTTCGAAGG GCCGTGTGAA GACGTCGTTT CGGATGGGCC ATGGCGCGTC GGACAATCTG GCGTATGAGA TTCCCTATCC TGAGTTCGCC GAAGAACCGG CCTTGAGTGA GTACTTCTCC CAGGCGTGGG CGGTCCGCAA GGAGCGACTG CAGGCGCAGG GCAGACTGCT CGGTGGTCGT GGCCCGGCGA CGATGTTCCC CAATATGTCG TTTTCGGCCG GTTTTCCGCG GACGATCCTG GTGTCACATC CGATCAGCCC GACCGAAACC GAGGTGTGGC GCTGGTATCT CGTCGACAAG AACGCACCCG ATGATGTGCG TGACTGGTTG CGCCGCTATT ACATGCGCTA CTCGGGTCCT GGAGGGATGA CGGAGCAAGA CGATATGGAG AACTGGAATT ACGCGACGCA GGCCAGCCAG GGCGTGATAG CCCGGCGCTA CCCCTACAAC TATCAGCAGG GTCTCGGCAA GGAAACTCCC AGTGAGCTCG ACCAGGCGGT GCATTCTCAC CAGCCCATCG CTGGCGAGGT GAATGCACGC GCCTTTTACC GGCGATGGGC CGAGTTCACC GACAACCTCT CGTGGCCCCT ACTCATCGAA CTCGCCAAAT CCGACGAGAG AGCCGCACGG TCGTGA
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Protein sequence | MTLKMSTSGG SDTTARSLVD VDRGEISREI FTDASIFNRE LEYLFPRSWL FVGHASQVSA PGQFFSSRMG SDPVLLTRDA QGGVNVLLNS CRHRGMAVCR YDEGRTLQFT CPYHGWSYSM DGSLVSTPGD LHGVPQQGMA YGNGLDKAAW GLVRAAKVHN YKGLVFACWD PSAPEFDEYV GDFHHWLDNL SDAFDGTEGG TEVFRGVQKW RIKSNWKFVS ENFLGDTYHG ATTHASVEQV GIGPGGRNSR RHGERQDQGG FSKGRVKTSF RMGHGASDNL AYEIPYPEFA EEPALSEYFS QAWAVRKERL QAQGRLLGGR GPATMFPNMS FSAGFPRTIL VSHPISPTET EVWRWYLVDK NAPDDVRDWL RRYYMRYSGP GGMTEQDDME NWNYATQASQ GVIARRYPYN YQQGLGKETP SELDQAVHSH QPIAGEVNAR AFYRRWAEFT DNLSWPLLIE LAKSDERAAR S
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