Gene Mmcs_5382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5382 
Symbol 
ID4114208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand+ 
Start bp5670814 
End bp5671476 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID638034537 
ProductGntR family transcriptional regulator 
Protein accessionYP_642538 
Protein GI108802341 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.180969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAAAC GCTACGGAGT CAAGGAGAAG GACCAGGTCG TCGCGTACGT CGTCGACCTG 
GTCCTGACCG GCCGGTTGCG CGGCGGGCAC CGCATCGACC GCAACGCGAT CGCCGAGGCG 
CTCGGGGTGA GCCGGGTGCC GGTCCAGGAG GCGATGGTCC AGCTCGAACA CGACGGCATC 
GTGTCGACGC GGTATCACCG GGGTGCGTTC GTCGAACGCT TCGACGCGGC GACGCTGCAC 
GAACACCACG AGCTGTACGG CGTGCTCACC GGCATCGCCT CCGCGAGGGC GGCCACCGAC 
CCGAACCCGG AACTGCTCGG CGAACTCGAC GACACGCTGC AGCATATGCG AAAAGGCAAG 
GATCGCAGGT TGTTCCACGA AGGTTGCCAA CGGTTCCGCG ACATCGTCAA CGAAGCGTAC 
GCCGGCCCGC GGCTGCACGC GGCGATCCGC GCGTCGCAGT GTTTCGCGGC GTCGGACTTC 
TGGGTGTCCT ATCCGCGGGT GCGGGCGGAA TTGCTGCCGA CCTACCAGCA GGAGGCGACG 
GCCATCGCCG CGCGGGACGC CGCCGGCGCA CGCACCGCCT GCCTCGAGCG GTCCGACCTC 
ATGGCCACGA TCATGGTCGC CGAGCTGACC CGCCGCGGCG TGCTGGCGGG CGACGGTGGT 
TAG
 
Protein sequence
MPKRYGVKEK DQVVAYVVDL VLTGRLRGGH RIDRNAIAEA LGVSRVPVQE AMVQLEHDGI 
VSTRYHRGAF VERFDAATLH EHHELYGVLT GIASARAATD PNPELLGELD DTLQHMRKGK 
DRRLFHEGCQ RFRDIVNEAY AGPRLHAAIR ASQCFAASDF WVSYPRVRAE LLPTYQQEAT 
AIAARDAAGA RTACLERSDL MATIMVAELT RRGVLAGDGG