| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5234 |
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| Symbol | |
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| ID | 4114062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | + |
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| Start bp | 5519949 |
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| End bp | 5521496 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638034391 |
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| Product | putative DNA-binding protein |
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| Protein accession | YP_642392 |
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| Protein GI | 108802195 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2508] Regulator of polyketide synthase expression |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.198671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTCACTT TGGACCGGCT CGTCAATGTG CTCGGCGGTT ACGGCGTCCA GTTCCGGGCG
GGTTCGGCGC CGCGCTCGAC CGAGTTGCGC ACCGTGGTGA TCCACGAGGA TCGCCACGTC
GTCGGCGACG TCCTGCTGGC GGTCGGAGCC GATTCGGTGG CCACCGCACT CGAATGGGCG
CGCGCCGCAC GGGCGGCGGT GGTGCTGGTC CGCGGCGACG ACGTCGGTGT GGACGCGACA
CCGGCCGGCG GGCCCGCGGT TCTCACGGTC GACCCCGACG TGTCCTGGAG TGAGTTGGCG
GCGCTGGTGT TCGGCCTGGT GCTCGAGGGG CGCGAGACGG AGTCCGGGCG CGGCCCGACC
GATCTGTTCG CGCTGGCCGA CAGCCTGGCC GACGCGATCG GCGGTGCGGT CACCATCGAG
GACCGGCACT GGCGGGTGCT GGCCTACTCG CGGATGCAGC AACACGCCGA TGACGCGCGC
GTCGCGACCA TCCTCGGTAG GCAGGCCCCC GACAGACTGC GGGCGCTGTT CACCGAACGC
GGCGTAGCCC GGCACCTCGC CAACTCGGAT GAACCGATGT TCGTGGCCCC CGCACCCGCC
GACGGGCTCG CCGGCCGGAT GGTGATCGCG GCCCGCGCCG GTCGCGAACT GCTCGGCTCG
GTGTGGGTGG CCTGCGCGGA GGAGTTGCGC GGTGACCAGC TGCGCGCGTT GGCCGACGGC
GCCCGCATGG TCGCACTGCA CCTGTTGCGG TCGCGGGCCA GCGCCGACCT CGAGCGCCAG
GTGGAATCCG ATCTGGTGAT CGGTCTGCTG GAGGGCACCG TCGACGCCCC GACGGTGGTG
AGCAAGCTGG CGTTGCCGCC TGCGGGACTG CGGGTCATCG CGCTGCGCGC CCGCCTCGGC
GAGGAACGCC ACGCGGCGCT GCTGTTGGCC TTCGAACGCG CGACCACGGG TTTCGGGTGG
TCGCGGCCCG GCCGCTCCAC GCTGTCGGCC ACCACCGTCT ACACCGTGTT GCCCAGCGAA
CCGGCGGAGA CCGCGCGCCG CTGGGTGGAC AGCCTGCGGG CCGCACTGCC GGAACGGGCC
GCCATCCTCG CCGGAATCAG CAGTACGGCA ACGGTTTTGG AACTGCCGAC GGCTCGTGAC
GAGGCCGACG AGTGCCTGGC GCTGCACGAA CTGCAGGGCG GCGTCGGCGA GGCGCCCGCC
TACGACGAGT CCTGGGACGA CATCGTGCTG CGGCGGCTGC GGATCGCCGC GCGCGTCGGC
CGCACCCCGC AACGCGGACC GGTGGCCGAC CTGCGGCGCC ACGACGAGCA TCACGGGACC
CGCTACGTGG ACACGCTGCG CGCCTGGCTG GCCGCGCAGG GAGATCTGCA CGAGGCGGCC
GAGCGCCTGG GCGTGCACGA GAACACCGTG CGCTACCGGC TGCGCAAGAT GGCCGAGGTC
ACCGACCTCG ACCTGACCGA CGCGCGCAAG CGGCTGGCCA TGACGGTCGA ACTCGCCGCT
ACAGACGACG ACGGTTTCAC GTTGTCGGAG GCCGACAAAA TTTCGTGA
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| Protein sequence | MVTLDRLVNV LGGYGVQFRA GSAPRSTELR TVVIHEDRHV VGDVLLAVGA DSVATALEWA
RAARAAVVLV RGDDVGVDAT PAGGPAVLTV DPDVSWSELA ALVFGLVLEG RETESGRGPT
DLFALADSLA DAIGGAVTIE DRHWRVLAYS RMQQHADDAR VATILGRQAP DRLRALFTER
GVARHLANSD EPMFVAPAPA DGLAGRMVIA ARAGRELLGS VWVACAEELR GDQLRALADG
ARMVALHLLR SRASADLERQ VESDLVIGLL EGTVDAPTVV SKLALPPAGL RVIALRARLG
EERHAALLLA FERATTGFGW SRPGRSTLSA TTVYTVLPSE PAETARRWVD SLRAALPERA
AILAGISSTA TVLELPTARD EADECLALHE LQGGVGEAPA YDESWDDIVL RRLRIAARVG
RTPQRGPVAD LRRHDEHHGT RYVDTLRAWL AAQGDLHEAA ERLGVHENTV RYRLRKMAEV
TDLDLTDARK RLAMTVELAA TDDDGFTLSE ADKIS
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