Gene Mmcs_5040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5040 
Symbol 
ID4113869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp5339725 
End bp5340555 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content72% 
IMG OID638034198 
Productglycerophosphodiester phosphodiesterase 
Protein accessionYP_642200 
Protein GI108802003 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCGG ATGACGGCGC GCTCGGCGGT CATCCGTTCG TCGTCGCGCA CCGCGGGGCC 
TCGGCCGATC GCCCCGAACA CACGCTGGCG GCCTACGAGC TGGCCCTCAA GGAGGGTGCC
GACGGGGTCG AGTGCGATGT CAGGCTCACC CGCGACGGCC ATCTGGTGTG CGTGCACGAC
CGGCGCGTGG ACCGCACCTC GTCCGGCACC GGGGTGGTCA GCGAGATGAC GCTGGCGGAG
CTGCGCGAGC TGGACTTCGG GTCGTGGCAC GCCAGTTCGC GACCGGATGC GGGCCCCGAC
ACGACGGACC TGCTGACGCT CGAGCGGCTG GTCGAGCTGG TACTGGATTG GCACCGGCCG
GTGAAGCTGT TCATCGAGAC CAAGCATCCG GTCCGCTACG GGGCGCTCGT GGAGAGCAAG
GTGCTGGCGC TGCTGCACCG GTTCGGTATC GCGACACCGG CGTCGGCCGA CCTCTCGCGC
GCGGTCGTGA TGTCGTTCTC GGCGGCCGCG GTGTGGCGGA TCCGACGCGC CGCCCCGATG
CTCCCGACCG TGCTGCTCGG TGACACGTCG CGGTATCTCG GGGGCGGCGC CGCCACCACC
GTGGGCGCGA CGGCGGTGGG GCCGTCGATC ATGACGCTGC GCGAACACCC CGAACTCGTC
GACCGGGCCG CCGCGCAGGG CAGGGCGATG TACTGCTGGA CCGTCGACCA CTACGAGGAC
GTGCGCTACT GCCGCGACCT CGGCGTGGCG TGGGTGGCGA CGAACCACCC GCGCCGCACC
AAGGACTGGC TGCAGAACGG GTTGACCGGC GCGGCCGGCA CCGATCGTTA G
 
Protein sequence
MNPDDGALGG HPFVVAHRGA SADRPEHTLA AYELALKEGA DGVECDVRLT RDGHLVCVHD 
RRVDRTSSGT GVVSEMTLAE LRELDFGSWH ASSRPDAGPD TTDLLTLERL VELVLDWHRP
VKLFIETKHP VRYGALVESK VLALLHRFGI ATPASADLSR AVVMSFSAAA VWRIRRAAPM
LPTVLLGDTS RYLGGGAATT VGATAVGPSI MTLREHPELV DRAAAQGRAM YCWTVDHYED
VRYCRDLGVA WVATNHPRRT KDWLQNGLTG AAGTDR