Gene Mmcs_5029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5029 
Symbol 
ID4113858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp5330984 
End bp5332237 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content70% 
IMG OID638034187 
Productseryl-tRNA synthetase 
Protein accessionYP_642189 
Protein GI108801992 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0172] Seryl-tRNA synthetase 
TIGRFAM ID[TIGR00414] seryl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.88851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGACC TCAAATTCCT GCGCGAGAAC CCCGACGCCG TACGCGCCTC ACAACGATCG 
CGCGGGGAGG ATCCCGCACT CGTCGACGCC CTGCTCGACG CCGACGCGGC CCGGCGCGCC
GCGGTGTCGG CCGCCGACAA CCTGCGCGCC GAACAGAAGG CGGCCAGCAA GAAGGTCGGC
AAGGCCTCGC CGGAGGAACG GCCCGCGCTG CTCACCCAGG CCAAGGAACT CGCCGAACAG
GTCAAGGCCG CCGAAGCCGC GCAGGCCGAC GCCGACCGCA CGTTCACCGC CGCGCACATG
GCGATCTCGA ACGTGGTCAT CGAGGGGGTG CCCGCGGGCG GCGAGGACTG CTTCGCCGTG
CTCGACGTCG TCGGTGAGCC GCGGGCAATC GACGACCCGA AGGACCACCT CGAACTCGGC
GAAGCGCTCG GGCTGATCGA CATGGAGCGC GGCGCGAAGG TGGCCGGATC GCGGTTCTAC
TTCCTCACCG GACGCGGCGC GCTGCTGCAA CTGGGCCTCA TGCAACTGGC GGTGCGCTTG
GCCACCGACA ACGGGTTCAC CCTCGTCATC CCGCCGGTGC TGGTGCGCCC GGAGGTGATG
GCGGGCACCG GGTTCCTCGG GGCGCACGCC GACGAGGTGT ACCGGCTGGA GTCCGACGAC
ATGTACCTGG TCGGCACCTC GGAGGTCCCG CTGGCCGGCT ACCACGCCGA CGAGATCATC
GACCTGTCCG CGGGCCCGCG CCGCTACGCC GGGTGGTCGT CGTGCTTCCG CCGGGAGGCA
GGCAGTTACG GCAAGGACAC CCGCGGCATC ATCCGCGTGC ACCAGTTCGA CAAGGTCGAG
GGCTTCATCT ACTGCAAACC CGAAGATGCT GCCGCCGAAC ATGATCGTCT GCTCGGCTGG
CAGCGCGAGA TGCTCGCCCT CATCGAGGTG CCGTACCGCG TGATCGACGT GGCCGCAGGG
GATCTCGGAT CGTCGGCCGC CCGCAAGTAC GACTGTGAGG CGTGGGTGCC GACACAGCAG
ACCTACCGCG AGCTGACCTC CACCTCGAAC TGCACGACGT TCCAGGCCAG GCGGCTGTCG
ACCCGCTACC GCGACGAGAA CGGCAAACCG CAGATCGCCG CCACCCTGAA CGGGACGCTG
GCCACCACCC GCTGGCTCGT CGCGATCCTG GAGAACCACC AGCAGCCCGA CGGCAGCGTG
CGGGTACCCG CGGCCCTGGT GCCGTTCGTC GGGACGGAGG TGCTCGAACC GTGA
 
Protein sequence
MIDLKFLREN PDAVRASQRS RGEDPALVDA LLDADAARRA AVSAADNLRA EQKAASKKVG 
KASPEERPAL LTQAKELAEQ VKAAEAAQAD ADRTFTAAHM AISNVVIEGV PAGGEDCFAV
LDVVGEPRAI DDPKDHLELG EALGLIDMER GAKVAGSRFY FLTGRGALLQ LGLMQLAVRL
ATDNGFTLVI PPVLVRPEVM AGTGFLGAHA DEVYRLESDD MYLVGTSEVP LAGYHADEII
DLSAGPRRYA GWSSCFRREA GSYGKDTRGI IRVHQFDKVE GFIYCKPEDA AAEHDRLLGW
QREMLALIEV PYRVIDVAAG DLGSSAARKY DCEAWVPTQQ TYRELTSTSN CTTFQARRLS
TRYRDENGKP QIAATLNGTL ATTRWLVAIL ENHQQPDGSV RVPAALVPFV GTEVLEP