Gene Mmcs_4939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_4939 
SymbolligC 
ID4113768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp5229412 
End bp5230473 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content69% 
IMG OID638034093 
ProductATP-dependent DNA ligase 
Protein accessionYP_642099 
Protein GI108801902 
COG category[L] Replication, recombination and repair 
COG ID[COG1793] ATP-dependent DNA ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAACTTC CCGTTTCACC CCCGATTGCG CCGATGCTGT CGAAGGCGGT CACGGACATC 
CCGCTCGGCG CGTCCTACGA ACCCAAGTGG GACGGGTTCC GGTCGATCGT GTTCCGCGAT
GGCGACGAGG TGGAACTCGG CAGCCGCAAC GAGCGGCCGA TGACCCGGTA CTTCCCCGAA
CTCGTCGAGG CGGCCCGCGC GGAGCTTCCG GCGCGGTGTG TGATCGACGG CGAGATCGTC
ATCGCCACCG CCGACGGACT GGACTTCGAG GCGCTGCAGT TGCGGTTGCA TCCGGCGGCG
TCGCGGGTGC GGATGCTGGC CGAGAAGACG CCGGCGTCGT TCATCGCGTT CGACCTGCTT
GCGCTGGGCG ACACCGACTA TACGTCGCGG CCGTTCGTCG AACGGCGGGC CGAACTTGAA
CGCGTGCTCA CCGGCGGCCA CACATTCCAC GTCACGCCGG CCACCGTCGA CGTCGACACG
GCACGGCGCT GGTTCCACGA ATTCGAGGGC GCCGGCCTCG ACGGGGTGAT CGCCAAACCG
CTCGACGGAC CGTATCTGCC GGACAAGCGG GTGATGTTCA AGGTCAAACA CCAGCGCACG
GCCGACTGCG TGGTCGCCGG GTACCGGCTG CACAAATCGG GCGACGACGC CATCGGGTCG
CTGCTGCTCG GTCTGTACAC CGACGACGGC GAGCTGGCGT CGGTGGGCGT GATCGGGGCG
TTTCCGATGG CGCGGCGGCG GGCCCTGTTC GCCGAGCTGC AGCCGCTGGT GGCCACCTTC
GACGAGCATC CGTGGAACTG GGCCGCCCAC GCCGATCCCG ACGTGGTGCG CCGCTACGGG
GGCGGGTCGC GCTGGAACGC GGGCAAGGAT CTGTCGTTCG TGCCGTTGCG GCCCGAACGG
GTGGTCGAGG TGCGGTACGA CCACATGGAG GGGCGGCGAT TCCGCCACAC CGCCCAGTTC
AACCGCTGGC GTCCCGACCG CGACCCGCGC TCGTGCACCT ACGCGCAACT CGAGCAGCCG
GTCACCTTCC GCCTCGGCGA CATCGTGCCG GGGCTCGGCT GA
 
Protein sequence
MQLPVSPPIA PMLSKAVTDI PLGASYEPKW DGFRSIVFRD GDEVELGSRN ERPMTRYFPE 
LVEAARAELP ARCVIDGEIV IATADGLDFE ALQLRLHPAA SRVRMLAEKT PASFIAFDLL
ALGDTDYTSR PFVERRAELE RVLTGGHTFH VTPATVDVDT ARRWFHEFEG AGLDGVIAKP
LDGPYLPDKR VMFKVKHQRT ADCVVAGYRL HKSGDDAIGS LLLGLYTDDG ELASVGVIGA
FPMARRRALF AELQPLVATF DEHPWNWAAH ADPDVVRRYG GGSRWNAGKD LSFVPLRPER
VVEVRYDHME GRRFRHTAQF NRWRPDRDPR SCTYAQLEQP VTFRLGDIVP GLG