Gene Mmcs_4871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_4871 
Symbol 
ID4113700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand+ 
Start bp5160327 
End bp5160989 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content72% 
IMG OID638034024 
ProductPadR family transcriptional regulator 
Protein accessionYP_642031 
Protein GI108801834 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCAACC CATTCACCCC ACCAGGCCCC TTCGGTTTCG GTCCCGTCGA CCGGCGCAGG 
CAGGCCCGCC GCGAATTCCG AGACCACTTG CGCGAGCACA GCGCCTCCGG TCCCGGTTTC 
GGCCGTGGCC CCGGTCGCGG TCCCGGCTTC GAGTTCGGGT TCGACCCGCG GGGCGGTTTC 
GGCTTCGGCC CGGGCCCGCG CGGTCGGCGC GGCGGTGGCC GCGGACGCGG ACGGCGCGGC 
GACGTGCGCG CCGCGATCCT CACATTGCTG GGCGAACGGC CGATGCACGG CTACGAGATG 
ATCCAGGAGA TCGCCGAACG CAGCGACGGC CTGTGGAAGC CGAGCCCCGG CTCGGTGTAC 
CCGACGCTGC AACTCCTCGT CGACGAAGGG CTGATCGTCG GCACCGAATC CGAGGGCAGC 
AAGAAGCTGT TCGAGCTGAC CGACGACGGC CGGGCGGCCG CCGCCAAGAT CGAGACCCCG 
CCGTGGGAGC AGATCACCGA CGACGCCGGC CCCGGTCACG CCGACCTGCG CAGTGCCGTC 
GGGCAGCTGG TGGGCGCCGT CGCACAGTCG TCCTACGCCG CCAGCGAGGA GCAGCAGGCC 
CGCATACTCG AGATCGTCAA CAACGCGCGC CGGGAGATCT ACGGCGTCCT CGGCGAGGAA 
TAG
 
Protein sequence
MSNPFTPPGP FGFGPVDRRR QARREFRDHL REHSASGPGF GRGPGRGPGF EFGFDPRGGF 
GFGPGPRGRR GGGRGRGRRG DVRAAILTLL GERPMHGYEM IQEIAERSDG LWKPSPGSVY 
PTLQLLVDEG LIVGTESEGS KKLFELTDDG RAAAAKIETP PWEQITDDAG PGHADLRSAV 
GQLVGAVAQS SYAASEEQQA RILEIVNNAR REIYGVLGEE