Gene Mmcs_4813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_4813 
Symbol 
ID4113642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp5097782 
End bp5098969 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content70% 
IMG OID638033965 
Productcolicin V production protein 
Protein accessionYP_641973 
Protein GI108801776 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCGT CTCAGTGGCT CGACTTCCTC GTCCTCGCCG TTGCCTTCGT CGCCGCCGTC 
TCGGGCTGGC GCTCAGGCGC GTTGGGGTCC CTCATGTCGT TCATCGGCGT GGTGCTCGGC
GCGGTCGCCG GCGTGCTGCT CGCCCCGCAC GTGGTCACCC ACATCAGCGG TCCCCGCACC
AAACTGTTCG CGGCGCTGTT CCTGATCCTC GCGCTGGTGG TGATCGGCGA GATCGCCGGC
GTGGTCCTGG GCCGTGCCGT GCGCGGTGCG ATCCGCAACC GCACGCTGCG CCTGTTCGAC
TCCGTGGTCG GGGTGGGCCT GCAGATCGGG GCGGTGCTGC TCGCGTCCTG GCTGCTGGCG
ACCCCGCTGA CGTCCTCGGA CCAGCCGAGC CTGGCCGCGG CCGTCAAGGG CTCACGGGTG
CTGGCCGAGG TGGACGACGT CGCACCGCCG TGGCTGAAGT CGGTGCCCAC ACGGCTCTCC
GGTCTTCTCG ACACCTCGGG CCTACCCGAA GTCCTCGAAC CGTTCGGCCG CACCCCGATC
GCGACGGTCG ACGCCCCGGA CGCGGCGCTG GCCACCGATG CCGTGGTCGG GGCGACACGT
GGCAGCGTGG TGAAGATCCG CGGTGTCGCG CCCGGCTGCC AGAAGGTGCT CGAGGGCACC
GGTTTCGTGG TGTCGCCGAA CCGGGTGATG TCCAACGCCC ACGTCGTCGC CGGCTCGGAG
AGCGTCACCG TGGAGGTCGA CGGTCAGACC TACGACGCCT TCGTGGTGTC CTACGACCCG
AACGCCGACA TCTCGATCCT CGACGTCCCG GACCTGCCCG CGGCGCCGCT GCCGTTCGTC
GACGAGTTGG CGCCCCCGGG GACCGACGCC ATCGTGATGG GCTATCCCGG CGGCGGCGAC
TTCACCGCCA CCCCGGCGCG GATCCGCGAG ACCATCGAGC TCAACGGGCC CGACATCTAT
CGCAAGACCA CGGTCACCCG CGAGGTCTAC ACCATCAGAG GGACTGTGCG TCAGGGCAAT
TCAGGTGGTC CGATGATCAA CCGCGGCGGC AAGGTGCTGG GTGTGGTGTT CGGCGCCGCA
GTCGACGACG CCGACACCGG GTTCGTGCTG ACCTCCGACG AGGTGGGGGC TCAGCTGGCC
AAGGTGGGTA ACACCGCACG GGTGCCCACC GGCGTCTGCG TGAGCTGA
 
Protein sequence
MTPSQWLDFL VLAVAFVAAV SGWRSGALGS LMSFIGVVLG AVAGVLLAPH VVTHISGPRT 
KLFAALFLIL ALVVIGEIAG VVLGRAVRGA IRNRTLRLFD SVVGVGLQIG AVLLASWLLA
TPLTSSDQPS LAAAVKGSRV LAEVDDVAPP WLKSVPTRLS GLLDTSGLPE VLEPFGRTPI
ATVDAPDAAL ATDAVVGATR GSVVKIRGVA PGCQKVLEGT GFVVSPNRVM SNAHVVAGSE
SVTVEVDGQT YDAFVVSYDP NADISILDVP DLPAAPLPFV DELAPPGTDA IVMGYPGGGD
FTATPARIRE TIELNGPDIY RKTTVTREVY TIRGTVRQGN SGGPMINRGG KVLGVVFGAA
VDDADTGFVL TSDEVGAQLA KVGNTARVPT GVCVS