Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4444 |
Symbol | |
ID | 4113273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 4725098 |
End bp | 4726930 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638033590 |
Product | ABC transporter related |
Protein accession | YP_641604 |
Protein GI | 108801407 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.949596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTCA CCGACTGGCG CGGACGCGTC AAGGAGAACC GGGACGGCGA CGACGGGAAC CTCCCGATCG ACGGGAGTGT GCCCCGCCGC CGCGAGGCCC GGGCCCTGCT GGGCAACCTG CTCAAGCCCT ATCGGATGAC GGTGTTCCTG CTCGCGCTGG TCGTGGTGGT GGAGAACCTT GCACGCCTGA GCGTTCCTCT GCTGGTGCAA CGGGGCATCG ATCACGGCAT CCCGCCGCTG CTCGAGGGTG GGCCCGCTCG GGAACTGATG CTGATCGTCG GCGCGCTGTG CGCGGTGGTG CTCGTACAGG CCGCCAGCCG GATGTTCTTT CTGCGCCGCT CGGGCCGGAT CGGCCAGAAG GTGCTGTTGG AGTTGCGCCG CAGGGTGTTC CGTCATTTCC AGCGTCTCGA CCTGGCCTTC CACGACCGGT ACACCTCCGG GCGGGTGGTG AGTCGGTCGA CCAACGACGT CGAGGCCATC CAGGACATGC TGGAGACCGG GTTCGACAGT CTGATCACCG CGGTGCTCAC GCTCGTCGGC ACCTCCATCC TGCTGGTGAC CCTCGACGTG AAGCTGGGTC TGATGTGCCT GGCCGCGTTC CCGATCCTGG TGGCGCTGGT GTGGTGGTTC CGCAACGAGT CGGCCAAGAC CTACCGCAAG GTGCGGGAGA GCGCCGCGCT GGTGATCGTT CAGTTCGTCG AGACGATGAC GGGCATCAAG GCGGTGCAGG CCTACCGGCG CGAACCGCGC AACCAGGAGA TCTTCGAGGA CATCGCCGAC GAGTACCGCG AGATCAACGA GCGGACCTTC CGGCTCCTGG CGATCTTCAT GCCCGGGGTG AAACTGGTCG GCAACATCAC CACCGGCGTG GTGCTGCTCT ACGGCGGCTA CCGGACGCTG AACGGTGAGA TGACGATCGG CACGCTGACC GCGTTCCTGC TGTATCTGCG AATGTTCTTC GAACCGATGC AGGAGATCTC GCAGTTCTTC AACACGTTCC AATCGGCGTC CTCGGCGCTG GAGAAGCTGG CCGGGGTGCT CGCCGAGCGG CCGGGGATCA AGGATCCCAC CGACCCGGTC CGCCTGGAGT CCGTGCGCGG TGAGATCTCC TTCGACGACG TGACGTTCGG CTATTCGCCG GACCGGCCGG TGCTGCCGGG GCTGACCGTG ACGGTGCCTG CCGGTCAGAC CGTCGCGCTG GTCGGCACCA CGGGTGCGGG TAAGACGACG ATCGCGAAGT TGATCGCGCG GTTCTACGAT CCGACGTCCG GCGCGGTCAC GCTCGACGGG ACCGATCTGC GGCGTCTGTC GCAGAGCGAG TTGCGCAGGC ACGTGGTGAT GTTGACGCAG GAGAACTTCA TGTTCGAGGG CACGGTCGCC GACAACATCC GGTTCGGCAA ACCCGAGGCC ACCGACGACG AGGTGCGTGC CGCGGCGCAG GCCGTCGGCG CGGACCGGTT CATCGACCTG TTGCCCGAGG GTTATGACAC CGACGTCGCC AAGCGCGGTG GCCGGCTGTC GGCCGGGCAG CGGCAACTCG TCGCGTTCGC GCGGGCGTTC CTGGCGGACC CGGCGGTGCT GATCCTCGAC GAGGCGACGT CGTCGCTGGA CATCCCGAGC GAGCGGATGG TGCAGCGGGC GCTGGAGACG GTGTTGAGTG ACCGCACCGC ACTGGTGATC GCGCACCGGC TCTCGACGGT TGCGATCGCC GACCGGGTGC TGGTGGTCGA AGGTGGCCGC ATCGTCGAGG ACGGCGCGCC GAGCGAGTTG ATCGGCCGCG ACGGCGGTCG CTATGCGGCC CTGCATCAGG CGTGGGAGCA GTCGTTGGCC TGA
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Protein sequence | MSVTDWRGRV KENRDGDDGN LPIDGSVPRR REARALLGNL LKPYRMTVFL LALVVVVENL ARLSVPLLVQ RGIDHGIPPL LEGGPARELM LIVGALCAVV LVQAASRMFF LRRSGRIGQK VLLELRRRVF RHFQRLDLAF HDRYTSGRVV SRSTNDVEAI QDMLETGFDS LITAVLTLVG TSILLVTLDV KLGLMCLAAF PILVALVWWF RNESAKTYRK VRESAALVIV QFVETMTGIK AVQAYRREPR NQEIFEDIAD EYREINERTF RLLAIFMPGV KLVGNITTGV VLLYGGYRTL NGEMTIGTLT AFLLYLRMFF EPMQEISQFF NTFQSASSAL EKLAGVLAER PGIKDPTDPV RLESVRGEIS FDDVTFGYSP DRPVLPGLTV TVPAGQTVAL VGTTGAGKTT IAKLIARFYD PTSGAVTLDG TDLRRLSQSE LRRHVVMLTQ ENFMFEGTVA DNIRFGKPEA TDDEVRAAAQ AVGADRFIDL LPEGYDTDVA KRGGRLSAGQ RQLVAFARAF LADPAVLILD EATSSLDIPS ERMVQRALET VLSDRTALVI AHRLSTVAIA DRVLVVEGGR IVEDGAPSEL IGRDGGRYAA LHQAWEQSLA
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