| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_4336 |
|---|
| Symbol | |
|---|
| ID | 4113166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 4613132 |
|---|
| End bp | 4613995 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638033482 |
|---|
| Product | DNA-formamidopyrimidine glycosylase |
|---|
| Protein accession | YP_641497 |
|---|
| Protein GI | 108801300 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0274442 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGAAC TGCCCGAGGT CGAAGCCCTG GCGGACCACC TGCGCCGCCA CGCCGTCGGA
CTGCCCATCG GACGCGTCGA CGTGTCGGCG TTCTCGGTGC TCAAGACGTT CGACCCGCCG
ATCACCGCAC TGCACGGCCG CGAGGTCACC GATGCGCACC GCTGGGGCAA GTACCTAGGG
CTGCAGGCCG GTGACCTCTA CCTGATCACC CACCTGTCCC GCGCCGGGTG GCTGCGCTGG
TCGGACAAAC TGGCCGCCGC ACCGCTGAAA CCCGGTAAGG GGCCGATCGC TCTGCGCGTG
CATCTCGGCA CCCCCGGCGC GGCACCCGGG TTCGATCTGA CCGAGGCCGG CACGCAGAAG
CGCCTGGCGG TCTGGCTGGT GTCCGACCCG TCCGCCGTGC CCGGGATCGC CGCGCTCGGG
CCGGATGCCC TGGAGCTGAC CGCCGACGAG CTGGGGGTCC TGCTGAGCAA GCAGAGCGGG
CGCATCAAGA CCGTCATCAC CGATCAGAAG GTGCTGGCCG GGATCGGCAA CGCCTACAGC
GACGAGATCC TGCACGTGGC GCAGCTTTCC CCGTTCGCCA CCGCCAACAA ACTGACCCCC
GAGCAGGTGG CCACCCTGCA CGACGCGATG CTCTCCGTGC TCACCGACGC GGTGTCACGG
TCGGTGGGCC AGCAGGCCGC GACGCTCAAG GGGGAGAAGC GGTCCGGGCT GCGGGTGCAC
GCGCGGACGG GGCTGCCGTG CCCGGTCTGC GGGGACACGG TGCGCGAGGT GTCGTTCGCC
GACAAGTCGT TCCAGTACTG CCCGACGTGC CAGACCGGCG GCCGGGTGCT CGCCGACCGT
CGCCTCTCGC GGCTGCTCAA GTAA
|
|---|
| Protein sequence | MPELPEVEAL ADHLRRHAVG LPIGRVDVSA FSVLKTFDPP ITALHGREVT DAHRWGKYLG
LQAGDLYLIT HLSRAGWLRW SDKLAAAPLK PGKGPIALRV HLGTPGAAPG FDLTEAGTQK
RLAVWLVSDP SAVPGIAALG PDALELTADE LGVLLSKQSG RIKTVITDQK VLAGIGNAYS
DEILHVAQLS PFATANKLTP EQVATLHDAM LSVLTDAVSR SVGQQAATLK GEKRSGLRVH
ARTGLPCPVC GDTVREVSFA DKSFQYCPTC QTGGRVLADR RLSRLLK
|
|---|
| |