Gene Mmcs_4330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_4330 
Symbol 
ID4113160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp4603985 
End bp4606342 
Gene Length2358 bp 
Protein Length785 aa 
Translation table11 
GC content67% 
IMG OID638033476 
ProductATP-dependent DNA helicase PcrA 
Protein accessionYP_641491 
Protein GI108801294 
COG category[L] Replication, recombination and repair 
COG ID[COG0210] Superfamily I DNA and RNA helicases 
TIGRFAM ID[TIGR01073] ATP-dependent DNA helicase PcrA 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.82343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGTGA ACGTGACTGA ACCGAGTTCC CGGCCTGACG ACAGGGCCGA GGAACTCCTC 
GACGGCCTCA ACCCGCAGCA GCGCCAGGCG GTGCTGCACG AGGGGTCGCC GCTGCTGATC
GTGGCGGGAG CGGGGTCGGG TAAGACCGCG GTGCTGACCC GCCGAATCGC CTACCTGCTG
GCCGCCCGCG ACGTCGGGGT CGGGCAGGTG CTGGCCATCA CGTTCACCAA CAAGGCCGCC
GCCGAGATGC GCGAACGCGT CGTCCATTTG GTGGGCCCGC GCGCGAGGTC GATGTGGGTG
GCGACGTTCC ACTCGACGTG TGTGCGCATC CTGCGCAACC AGGCGTCGCT GCTGCCCGGG
CTGAACTCCA ACTTCTCGAT CTACGACGCC GACGATTCGC GGCGGCTGCT GTTGATGATC
GGCAAGGACA TGGGCCTGGA CACCAAGAAG TACTCGCCCC GCCTGCTGTC CAACGGGATC
TCGAACCTGA AGAACGAGCT GATCGGGCCC GAACAGGCCG CCGCCGAGGC GTCGGAGGCC
GCCGACGACC TGGCCCGCAT CATCGCCGAC GTCTACGCCG AGTACCAGCG CCGGCTGCGC
GCCGCCAACG CGCTGGACTT CGACGACCTG ATCGGCGAGA CGGTCGCTGT GCTGCAACGT
TTTCCGCAGA TCGCGCAGTA CTACCGCCGG CGCTTCCGGC ACATCCTGGT CGACGAATAC
CAGGACACCA ACCACGCCCA GTACGTGCTG GTGCGCGAGC TCGTAGGGGG CGGCGCCCAC
GACACCGGAG AGGTGGCACC CGCGGAGCTC TGCGTGGTGG GCGACGCCGA CCAGTCGATC
TACGCGTTCC GCGGCGCGAC GATCCGCAAC ATCGAGGACT TCGAACGCGA CTATCCCAAC
GCGACGACCA TCCTGCTCGA GCAGAACTAC CGCTCCACCC AGACCATCCT CAACGCCGCC
AACTCGGTGA TCGCCCGCAA CGCCGGCCGG CGCGAGAAGC GGCTGTGGAC GGACTCCGGC
CACGGGGAGC TGATCGTCGG CTACGTCGCC GACAACGAAC ACGACGAGGC CCGGTTCGTC
GCGCAGGAGA TCGACCGGCT GGCCGATGAC GGCCACAGCT ACAACGATTT CGCCGTCTTC
TACCGGACCA ACAACAACTC CCGTGCGTTG GAAGAGGTGT TCATCCGCGC CGGCATCCCG
TACAAGGTCG TCGGCGGCGT CCGGTTCTAC GAACGCCGCG AGATCCGCGA CATCGTCGCC
TACCTGCGGG TACTCGACAA CCCCGGCGAC TCGGTGAGCA TGCGCCGCAT CCTCAACACC
CCGCGGCGCG GGATCGGCGA CCGGGCCGAG GCGTGTGTGG CGGTGTACGC CGAGAACACC
GGTGCCAGCT TCAACGACGC GCTGCAGGCC GCCGCCGAGG GCAAGGTGCC GATGCTCAAC
ACCCGCTCGG AGAAGTGCAT CGCGAGTTTC GTGCAGATGC TCGACGATCT GCGCGGCCGC
CTCGGTGACG AACTCGGCGA ACTCGTCGAG GCGGTGCTCG ACCGCACCGG CTACCGCGCG
GAGCTCGAGG CGTCCAATGA TCCGCAGGAC CTCGCGCGGC TGGACAACCT CAACGAATTG
GTCAGCGTCG CACACGAGTT CAGCATCGAC CGGGCGAACG CCGCGGCGCT GGCCGAAGAC
CTCGACGAAC CGGTCGACGA GGACATCCCC GATACCGGTG TGCTGGCGCA GTTCCTCGAG
CGGGTGTCGC TGGTGGCCGA CGCCGACGAC ATCCCCGAGC ACGGCTCGGG CGTCGTCACC
ATGATGACGC TGCACACCGC CAAGGGACTG GAGTTCCCCG TCGTGTTCGT CACCGGCTGG
GAGGACGGCA TGTTCCCGCA CATGCGGGCA CTCGGCGATC CCAACGAACT GTCCGAGGAA
CGCCGGTTGG CCTACGTCGG CATCACCCGG GCCCGTCAGC GGCTCTATCT CAGCCGGGCG
AAGGTGCGCT CGTCGTGGGG GCAACCCATG CTCAACCCGG AGTCGCGGTT CCTGCGGGAG
ATCCCGCAGG AGCTCATCGA CTGGCGGCGC ACCGATCCCG AGAACAGAAG GCCGTCGTTC
AGCGCGCCCA GCCGGATGTC GTCGGGCTCC TCCGGTACGA GTTTCGGCGC ACCGCGCCCG
TCGCCGATGC GCTCGGGTGG CGGTAAGAAG CCGCTGATCG TGCTCGAACC GGGTGACCGC
ATCAACCACG ACAAGTACGG TCTGGGCCGC GTCGAAGAGG TCTCGGGCGT CGGCGAATCC
GCGATGTCAC TGATCGACTT CGGCAGCGCC GGACGCGTCA AGCTGATGCA CAACCACGCT
CCGGTGCAGA AGCTCTAA
 
Protein sequence
MSVNVTEPSS RPDDRAEELL DGLNPQQRQA VLHEGSPLLI VAGAGSGKTA VLTRRIAYLL 
AARDVGVGQV LAITFTNKAA AEMRERVVHL VGPRARSMWV ATFHSTCVRI LRNQASLLPG
LNSNFSIYDA DDSRRLLLMI GKDMGLDTKK YSPRLLSNGI SNLKNELIGP EQAAAEASEA
ADDLARIIAD VYAEYQRRLR AANALDFDDL IGETVAVLQR FPQIAQYYRR RFRHILVDEY
QDTNHAQYVL VRELVGGGAH DTGEVAPAEL CVVGDADQSI YAFRGATIRN IEDFERDYPN
ATTILLEQNY RSTQTILNAA NSVIARNAGR REKRLWTDSG HGELIVGYVA DNEHDEARFV
AQEIDRLADD GHSYNDFAVF YRTNNNSRAL EEVFIRAGIP YKVVGGVRFY ERREIRDIVA
YLRVLDNPGD SVSMRRILNT PRRGIGDRAE ACVAVYAENT GASFNDALQA AAEGKVPMLN
TRSEKCIASF VQMLDDLRGR LGDELGELVE AVLDRTGYRA ELEASNDPQD LARLDNLNEL
VSVAHEFSID RANAAALAED LDEPVDEDIP DTGVLAQFLE RVSLVADADD IPEHGSGVVT
MMTLHTAKGL EFPVVFVTGW EDGMFPHMRA LGDPNELSEE RRLAYVGITR ARQRLYLSRA
KVRSSWGQPM LNPESRFLRE IPQELIDWRR TDPENRRPSF SAPSRMSSGS SGTSFGAPRP
SPMRSGGGKK PLIVLEPGDR INHDKYGLGR VEEVSGVGES AMSLIDFGSA GRVKLMHNHA
PVQKL