Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4068 |
Symbol | |
ID | 4112898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 4336377 |
End bp | 4337129 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638033211 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_641229 |
Protein GI | 108801032 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAATCA AAGACGCCGC CGCCGTCGTC ACCGGCGGAG CATCGGGTCT CGGCCTGGCC ACCACGAAGC GGCTGCTCGA CCGGGGCGCC TCGGTCGTGG TCATCGACCT CAAAGGTGAA GAGGCCGTCA AGGAACTGGG CGACCGCGCC AAGTTCGTGC AGGCCAACGT CACCGATCCC GAGCAGGTCA GCGCAGCGCT GGACGCCGCG GAGGAGATGG GCCCGCTGCG CATCAACGTC AACTGCGCCG GTATCGGCAA CGCGATCAAG ACGCTGAGCA AGAACGGCGC GTTCCCGCTC GACGAGTTCA ACAAGGTCAT CCAGGTCAAC CTGGTCGGCA CCTTCAACGT GCTGCGGCTG AGCGCCGAGC GGATCGCCAA GACCGAACCG ATCAACGGTG AGCGTGGCGT CATCATCAAC ACCGCCTCGG TGGCCGCGTT CGAGGGCCAG ATCGGCCAGG CCGCGTACTC GGCGTCCAAG GGCGGCGTCG TCGGCATGAC CCTGCCCATC GCCCGCGACC TGTCGCGCGA GTTCATCCGC GTCTGCACCA TCGCCCCCGG TCTGTTCAAG ACCCCGCTGC TGGGCTCGCT GCCCGAGGAG GCGCAGAAGT CGCTCGGCCA GCAGGTCCCG CATCCCGCGC GGCTCGGCGA TCCGGACGAG TACGGCGCGC TCGCCGTCCA CATCGTCGAG AACCCGATGC TCAACGGCGA GACGATCCGC CTGGACGGCG CGATCCGGAT GGCGCCGAGG TAG
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Protein sequence | MEIKDAAAVV TGGASGLGLA TTKRLLDRGA SVVVIDLKGE EAVKELGDRA KFVQANVTDP EQVSAALDAA EEMGPLRINV NCAGIGNAIK TLSKNGAFPL DEFNKVIQVN LVGTFNVLRL SAERIAKTEP INGERGVIIN TASVAAFEGQ IGQAAYSASK GGVVGMTLPI ARDLSREFIR VCTIAPGLFK TPLLGSLPEE AQKSLGQQVP HPARLGDPDE YGALAVHIVE NPMLNGETIR LDGAIRMAPR
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