Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_3980 |
Symbol | |
ID | 4112810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 4246122 |
End bp | 4247339 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638033123 |
Product | ABC transporter related |
Protein accession | YP_641141 |
Protein GI | 108800944 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGAAA TCGTCTTGGA CAAGGTGACC AAGAGTTATC CGAACGGCGC GACGGCGGTG AAGGAACTGT CGATCACGAT CGCCGACGGC GAGTTCATCA TCCTGGTCGG ACCGTCCGGT TGCGGGAAGT CGACGACGCT CAACATGATC GCCGGACTCG AGGACATCAC CTCCGGTGAA CTGCGCATCG GCGGGCAGCG CGTCAATGAC AAGGCGCCCA AGGACCGCGA CATCGCGATG GTGTTCCAGT CCTATGCGCT GTACCCGCAC ATGAGCGTGC GGCAGAACAT CGGCTTCCCG CTCACGCTGG CGAAGGTCAA CAAGGACGAG ATCAACCGGA AGGTCGAGGA GACCGCGAAG ATCCTCGACC TCACCGAACT GCTCGACCGC AAACCCGGTC AACTCTCCGG TGGGCAGCGC CAGCGCGTGG CGATGGGACG CGCGATCGTG CGCAACCCCA AGGCATTCCT GATGGACGAG CCGTTGAGCA ACCTCGACGC GAAGCTGCGT GTGCAGATGC GCTCGGAGAT CTCCCGGCTC CAGAACCGGC TGGGCACCAC CACCGTCTAC GTCACCCACG ACCAGACCGA GGCGATGACG CTCGGCGACC GCGTCGTGGT CATGCTCGCC GGGGTCGCGC AGCAGATCGG CTCGCCCGAA GAGCTCTACA ACCGGCCGGC GAACCTGTTC GTCGCCGGGT TCATCGGCTC GCCCGCGATG AATTTCTTCC CGGCGTCGCT GACCGACGTG GGGGTGCGCC TGCCGTTCGG CGAGGTCACG CTGACCCAGG AGGCGTACGA CCTGATCAAC CGGCGGGGTA AGCCCAAGAA CATCATCGTC GGTGTCCGGC CCGAACACCT CGAGGACGCC TCGGTGCTCG ACGGCTACGC CCGGATCCGC GCGCTGAACT TCGAGGTCAC CGCCGACATG GTGGAGTCGC TGGGCGCGGA GAAGTACGTG CACTTCCGCA CCGAGGGCGC GGGCGCCCGG TCCGCCCAGC TCGAGCAGCT CACCGTCGAA TCCGGTCAGG GTGAGAACGA GTTCGTCGCG AGGGTCTCCA CCGAATCCCC GGTCCGGCAG GGCGACACGA TCGAGCTGGC GCTCGACACC TCGAAACTGG TGATCTTCGA CGGTGATTCG GGGGAGAACC TGACCATCCC CGACGAGCGC TCCGAGGAGC CGCCGGCGAT CGTGGAACCG GCCAAGCCCG CCGAGTGA
|
Protein sequence | MAEIVLDKVT KSYPNGATAV KELSITIADG EFIILVGPSG CGKSTTLNMI AGLEDITSGE LRIGGQRVND KAPKDRDIAM VFQSYALYPH MSVRQNIGFP LTLAKVNKDE INRKVEETAK ILDLTELLDR KPGQLSGGQR QRVAMGRAIV RNPKAFLMDE PLSNLDAKLR VQMRSEISRL QNRLGTTTVY VTHDQTEAMT LGDRVVVMLA GVAQQIGSPE ELYNRPANLF VAGFIGSPAM NFFPASLTDV GVRLPFGEVT LTQEAYDLIN RRGKPKNIIV GVRPEHLEDA SVLDGYARIR ALNFEVTADM VESLGAEKYV HFRTEGAGAR SAQLEQLTVE SGQGENEFVA RVSTESPVRQ GDTIELALDT SKLVIFDGDS GENLTIPDER SEEPPAIVEP AKPAE
|
| |