Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_3958 |
Symbol | |
ID | 4112788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 4216974 |
End bp | 4218230 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638033101 |
Product | drug antiporter protein |
Protein accession | YP_641119 |
Protein GI | 108800922 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00900] H+ Antiporter protein |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGCCA GCAAGCGCGT CCCGCTGTAC CTCATCTACT TCTCGGCCTT GACCGCCGGA GCGGGTAACG GCATCTCGCT GGTCGCCTTC CCCTGGCTGG TGTTGCAGCG CAACGGCTCA GCGGTCGACG CGTCGATCGT CGCGATGGCC GGAACGCTGC CACTGCTGGT CGCCACGCTG ATCGCCGGCG CCGCGGTCGA CTACCTGGGC CGGCGCCGGG TGTCGATGAT CGCTGATGGT TTGTCTGCCC TGTCCGTCGC GGCGGTGCCC GTGCTGGCGT GGACGTTCGG CGTGCAGGCG GTCAATGTGG CGGTGCTGGC CGGACTCGCG GCCCTGGGTG CGTTCTTCGA TCCCGCCGGG ATGACCGCCC GCGAGACGAT GCTGCCCGAG GCCGCGCACC GGGCCGGGTG GACGCTCGAC CACGCCAACA GCGTGTACGA GGCCGTGTTC AACCTGGCCT ACATCGTCGG GCCGGGCATC GGTGGTCTGC TGATCGCGAC GATGGGCGGC GTCAACACCA TGTGGGTCAC GGCCGCGGCG TTCGTCCTGT CGATCGGCGC CATCGCCGCG CTGCAGCTCG AGGGTGCGGG ACGACCCGAC CGCGACCAGC TGCCCGAGCG GGTGTGGTCG GGCATCGTGG AGGGTCTCGG ATTCGTCTGG CGCACACCGG TGTTGCGCAC CCTGGCGGTG GTGGACCTGG TCGCCACCGG GCTGTACATG CCGATGGAGA GCGTGCTGTT CCCGAAGTAC TTCACCGACC GCGACGAACC CGCGCAGCTG GGCTGGGTCC TGATGGCGCT GTCGATCGGG GGGCTGGTGG GCGCCCTCGG CTATGCCGCG CTGTCGCGAT ACGTCAACCG CCGCACGGTG ATGCTGGCCG CCGTGCTCAC CCTCGGCGTC GCGATGACCG TCATCGCGTT CCTTCCGCCG CTGCCGGTGA TCCTGGTCCT CTCGGCGCTC GTCGGACTGG TCTACGGGCC GATCGCGCCG ATCTACAACT ACGTCATGCA GACGCGCGCG CCGGCCCACC TGCGCGGCCG CGTGGTCGGG GTGATGGGGT CGCTGGCGTA TGCAGCGGGC CCGCTCGGCC TGGTGGTGGC GGGTCCACTG GCCGACGGCG CCGGCCTGTC CGTGACGTTC CTCGCGCTCG CACTGCCGAT GCTCGCCCTC GGTGTGGCGG CCGTCTTCCT GCCCGCCCTG CGCGAACTCG ACCGGGAACC GGCCCGACCC CTCAGAGGCG AACCCGGGGC GGGGTGA
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Protein sequence | MIASKRVPLY LIYFSALTAG AGNGISLVAF PWLVLQRNGS AVDASIVAMA GTLPLLVATL IAGAAVDYLG RRRVSMIADG LSALSVAAVP VLAWTFGVQA VNVAVLAGLA ALGAFFDPAG MTARETMLPE AAHRAGWTLD HANSVYEAVF NLAYIVGPGI GGLLIATMGG VNTMWVTAAA FVLSIGAIAA LQLEGAGRPD RDQLPERVWS GIVEGLGFVW RTPVLRTLAV VDLVATGLYM PMESVLFPKY FTDRDEPAQL GWVLMALSIG GLVGALGYAA LSRYVNRRTV MLAAVLTLGV AMTVIAFLPP LPVILVLSAL VGLVYGPIAP IYNYVMQTRA PAHLRGRVVG VMGSLAYAAG PLGLVVAGPL ADGAGLSVTF LALALPMLAL GVAAVFLPAL RELDREPARP LRGEPGAG
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