Gene Mmcs_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3948 
Symbol 
ID4112778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp4208308 
End bp4210521 
Gene Length2214 bp 
Protein Length737 aa 
Translation table11 
GC content72% 
IMG OID638033091 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_641109 
Protein GI108800912 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01525] heavy metal translocating P-type ATPase
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.4217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCGG TCGTCCTCGC CGTCGGCGGC ATGACCTGTG CGTCCTGCGC GGCCCGCGTC 
GAGAAGAAGC TCAACCGGAT CGACGGGGTC AGCGCGTCGG TGAACTACGC GACCGAACAG
GCCACCGTCT CCTATCCCGA CACCGTGCGA CCGGAGGATC TGGTCGCCGC GGTCGAGGCG
ACCGGATACA CCGCGACCCT GCCCACCCCC GAACCCGAGG AACCGGAGCC ACGCGGGGAA
CCCGACGAGG CCGCCGCATG GCGACAGCGG TTGACCATCT CTGCGGCGCT GAGCCTCCCG
GTGGTGCTGC TGTCGATGAT CCCGGCGCTG CAGTTCGACA ACTGGCAGTG GTTGGCGCTC
ACCCTCGCCT CCCCCGTCGT GGTGTGGGGC GCATGGCCGT TCCACCGGGC CGCATGGATG
AACCTGCGCC ACGGCGCGGC GACCATGGAC ACGCTGATCT CGGTCGGTGT GACCGCCGCG
TACCTGTGGT CGCTGTGGGC GCTGTTCTTC ACCCACGCCG GCATGCCGGG GATGACCATG
TCGTTCGACC TGCTGCCGTC GGACACCGGC GATGTGCACC TCTACCTCGA GGTCGCCGCC
GCGGTGACCA CGTTCCTCAC CGCGGGCCGC TACTTCGAGG CGCGCGCCAA ACGTCAGTCC
GGCGCGGCGC TGCGTGCGCT GCTCGACATG GGCGCCAAAG ACGTTGCCGT GCTGCGTGAT
TCCCGTGAGG TGCGGATTCC CGTCGGCCAG CTGACCGTCG GCGACGAGTT CGTGGTGCGC
CCCGGCGAGA AGATCGCGAC CGACGGGGTC GTGGTGTCCG GCTCCTCGGC CGTCGACCAG
TCGATGCTGA CCGGTGAATC GGTGCCCGTC GAGAAGGGCC CCGGTGACGA CGTCGTCGGC
GCGACCGTCA ACGTCGGCGG CCGCCTCACG GTGCGCGCCA CCCGGGTGGG CGCCGACACC
CAGCTGGCGC AGATGGCCCG GCTGGTCAAC GAGGCGCAGA GCGGTAAGGC CGAGGTGCAG
CGGCTGGCCG ACCGGGTGTC GGCGGTCTTC GTCCCGGTGG TCATCGGGCT GTCGCTCCTG
ACCCTGGCCG GATGGCTGCT GGTCGGCGGA CCGGTCAGCG CCGCGTTCAC GGCGGCGGTT
GCCGTGCTGA TCATCGCCTG CCCCTGCGCA CTCGGCCTGG CCACCCCGAC CGCGCTGCTG
GTCGGCACGG GTCGGGGCGC CCAGCTGGGC ATCCTGATCA AGGGTCCGCA GATGCTGGAG
TCCACCCGCC GCGTCGACAC CGTCGTGCTG GACAAGACCG GAACCGTCAC CACCGGCCAG
ATGTCCGTCG TCAGCACCCA TGCCGACGAG GCGACGATGC GGCTGTTCGG CGCCTTGGAG
AGCGCGTCGG AGCACCCCAT CGCCCGTGCG ATCGCCGCGC ACGCCGCCGA ACGCGGTCAG
CTGCCGGCGG TCGAGCAGTT CGAGAACCAC GGGGGCAGCG GGGTCAGCGG AGTCGTCGAC
GGGCACCGCG TCGCGGCCGG GCGGCTGGCC TGGCTGTCCC GGGACACCGC GGCGCCGGTG
CCCCCGGATC TGCGCGAGGT CGCCGAGGCG GCCGAGGCGG AGGGACGGAC CCCGGTGTGG
TTCGCCGTGG ACGGGGAGAT CTGCGGGGTC GCCGTCGTCT CCGACACGGT CAAGGACCAC
GCGGTCGACG CGATCGCCGA CCTGCGCGCG CTCGGGCTGA CCCCGGTGCT GCTGACCGGA
GACAACCGGC GCGCCGCGCA GGCGGTGGCC CGGCAGGTCG GTATCGACGT CCGCGACGAC
ACCGTCATCG CCGAGGTGCT GCCGCAGGAC AAGGTCGACG CCGTCCGGGC GCTGCAGCGC
GACGGCAAGG TGGTCGCGAT GGTCGGTGAC GGCGTGAACG ACGCCGCCGC GCTGGCACAG
GCCGACCTCG GCCTGGCGAT GGGCACGGGC ACCGACGCGG CGATCGAGGC GTCGGACCTC
ACGCTCGTGA CCGGCGACCT GCGCGCCGTG CCGGACGCGA TCCGGCTGTC GCGCGCCACG
TTGCGCACGA TCAAGGGAAA CCTGTTCTGG GCGTTCGCCT ACAACGTCGC CGCGCTGCCG
TTGGCGGCGT TCGGTCTGCT CAACCCGTTG ATCGCCGGTG CGGCGATGGC GTTCAGCTCG
GTGTTCGTGG TCACCAACAG CCTGCGGCTG CGGCGGTTCA CCCCGTCGCG GTGA
 
Protein sequence
MSSVVLAVGG MTCASCAARV EKKLNRIDGV SASVNYATEQ ATVSYPDTVR PEDLVAAVEA 
TGYTATLPTP EPEEPEPRGE PDEAAAWRQR LTISAALSLP VVLLSMIPAL QFDNWQWLAL
TLASPVVVWG AWPFHRAAWM NLRHGAATMD TLISVGVTAA YLWSLWALFF THAGMPGMTM
SFDLLPSDTG DVHLYLEVAA AVTTFLTAGR YFEARAKRQS GAALRALLDM GAKDVAVLRD
SREVRIPVGQ LTVGDEFVVR PGEKIATDGV VVSGSSAVDQ SMLTGESVPV EKGPGDDVVG
ATVNVGGRLT VRATRVGADT QLAQMARLVN EAQSGKAEVQ RLADRVSAVF VPVVIGLSLL
TLAGWLLVGG PVSAAFTAAV AVLIIACPCA LGLATPTALL VGTGRGAQLG ILIKGPQMLE
STRRVDTVVL DKTGTVTTGQ MSVVSTHADE ATMRLFGALE SASEHPIARA IAAHAAERGQ
LPAVEQFENH GGSGVSGVVD GHRVAAGRLA WLSRDTAAPV PPDLREVAEA AEAEGRTPVW
FAVDGEICGV AVVSDTVKDH AVDAIADLRA LGLTPVLLTG DNRRAAQAVA RQVGIDVRDD
TVIAEVLPQD KVDAVRALQR DGKVVAMVGD GVNDAAALAQ ADLGLAMGTG TDAAIEASDL
TLVTGDLRAV PDAIRLSRAT LRTIKGNLFW AFAYNVAALP LAAFGLLNPL IAGAAMAFSS
VFVVTNSLRL RRFTPSR