Gene Mmcs_3855 details

Gene Information

• Locus tag: Mmcs_3855
• ID: 4112685
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 4098098
• End bp: 4100095
• Gene Length: 1998 bp
• Protein Length: 665 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 638032994
• Product: helicase c2
• Protein accession: YP_641016
• Protein GI: 108800819
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG1199] Rad3-related DNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.210682
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCCACGG GTAACGACGA CGCCGGCGAA CGCGTCACCG ATCTGTTGGC CGCGGCCGTC 
GCTGCGGTGG GCGGTGCCGA GCGGCCCGGT CAGGTCGAGA TGGCCAGGGC CGTGGCGACG 
GCGTTCGACA CCGGCCGGCA CCTCGCGGTG CAGGCCGGCA CCGGCACCGG CAAGTCGCTG 
GCCTATCTCG TGCCCGCGAT CGCCCACGCG ATCGCCGTCG ACGAACCGGT CGTGGTGTCG 
ACCGCCACGA TCGCCCTGCA GCGCCAGCTC GTCGACCGCG ACCTGCCCCG CCTCGCCGAC 
GCCCTGAGCG GGTCGCTGCC GCGCCGACCG CAGTTCGCGT TGCTCAAGGG CCGCGGAAAC 
TACCTGTGTC TCAACAAGAT TCACAACGGG AGCACCGGAA TCGGCGACGC CCCCGACGAC 
CGGCCCCAGG AGGAGCTCTT CGACGCGGTC GCGGCCACCG CCCTGGGCCG AGACGTGCAG 
CGGCTGACCA AGTGGGCGTC GGACACCGAG ACCGGTGACC GCGACGAACT GCGACCCGGC 
GTCCCCGAGC GGTCGTGGCG TCAGGTCAGC GTGTCGGCGC GGGAGTGCAT CGGCGTCTCC 
CGATGCCCGT ACGGCACCGA CTGCTTCGCC GAGAAGGCCC GCGAGAAGGC GGCCGACGTG 
GACGTGGTGG TGACCAACCA CGCGCTGCTG GCGATCGATG CGATCTCCGA TGCCGCGGTG 
CTGCCCGAAC ACAGCGCGGT GGTGATCGAC GAGGCGCACG AACTGGCCGA CCGGGTGACG 
TCGGTGGCGA CCGGTGAGCT CTCGGCGACC TCGCTGGGCA TCGCCCACCG CCGGGTGGCG 
CGGCTGGTCG AGGGTGAGCT CGCGGATCGG CTGGAGGCCG CCGTCGCCAC CGTGTCGTCG 
GCCATCCACG ACGGCACGCC CGGACGCATC GACCGCCTCG ACGACGAGCT GGCCACCTAC 
CTGACCGCGC TGCGCGACGC GGCCGACCGG GCCCGGTCGG CGATCGACAC CGCACCGAGC 
GATCCGAAGG CCGCCGCCGC GCGCACCGAG GCGGTGACCG CGCTGAGCGA TGTCAGCGAC 
ACCGCCAACC GGATCCTGGA CTCCTTCGTT CCCGCCATCC CCGACCGCGT CGACGTCGTG 
TGGCTGGACC ACGAGGGCGG CGGCGCCGGT TCGGTCAGCG CGATCCTGCG GGTGGCGCCG 
CTGTCGGTGG CCGGGCTGCT GCGCACCCGG CTGTTCGAGC ACGCGACCAC CGTGCTGACG 
TCGGCGACGC TGACCGTGGG CGGCAACTTC GAGGCGATGG CCCGGGCCTG GGGGCTGGCC 
GACACCAAGT GGCACGGACT CGACGTCGGC TCACCGTTCG ACCATGCCAA GGCCGGGATC 
CTCTACGTCG CCGCCCACCT CCCGCCGCCC GGCCGCGACG GCACCGGTTC GGCCGAACAG 
CTCAAGGAGA TCGAGGCCCT GATCACCGCC GCGGGCGGAC GCACGCTGGG CCTGTTCTCC 
TCCATGCGGG CGGCGAAGGC CGCCGCGGAG GTGATGCGCG ACCGGCTCGA CACCCCGGTG 
CTGTGCCAGG GTGAGGACAC CACCTCGGCG CTGGTGGAGC GGTTCGCCGA CGATCCGCAG 
ACCTCGCTGT TCGGCACGCT GTCGCTGTGG CAGGGCGTCG ACGTGCCGGG GCCGTCGCTG 
TCGCTGGTGC TCATCGACCG GATCCCGTTC CCGCGGCCCG ACGATCCGTT GCTGACGGCC 
AGGCAGCGGG CGGTCACCGC ACACGGCGGC AACGGTTTCA TGGCCGTCGC GGCCTCGCAC 
GCCGCACTGC TGCTCGCCCA GGGGGCCGGC CGGTTGCTGC GGCGCACCGA CGACCGCGGT 
GTGGTCGCGG TCCTGGACTC GCGCATGGCG ACGGCCCGCT ACAGCGGTTA CCTGCGCGCC 
TCGCTGCCGC CGTTCTGGGC CACCACCGAC CCGGCCCGGG TGCGCGCGGC GCTCGAACGC 
CTCCGCGCCG GGTCCTGA 

 

Protein sequence

MATGNDDAGE RVTDLLAAAV AAVGGAERPG QVEMARAVAT AFDTGRHLAV QAGTGTGKSL 
AYLVPAIAHA IAVDEPVVVS TATIALQRQL VDRDLPRLAD ALSGSLPRRP QFALLKGRGN 
YLCLNKIHNG STGIGDAPDD RPQEELFDAV AATALGRDVQ RLTKWASDTE TGDRDELRPG 
VPERSWRQVS VSARECIGVS RCPYGTDCFA EKAREKAADV DVVVTNHALL AIDAISDAAV 
LPEHSAVVID EAHELADRVT SVATGELSAT SLGIAHRRVA RLVEGELADR LEAAVATVSS 
AIHDGTPGRI DRLDDELATY LTALRDAADR ARSAIDTAPS DPKAAAARTE AVTALSDVSD 
TANRILDSFV PAIPDRVDVV WLDHEGGGAG SVSAILRVAP LSVAGLLRTR LFEHATTVLT 
SATLTVGGNF EAMARAWGLA DTKWHGLDVG SPFDHAKAGI LYVAAHLPPP GRDGTGSAEQ 
LKEIEALITA AGGRTLGLFS SMRAAKAAAE VMRDRLDTPV LCQGEDTTSA LVERFADDPQ 
TSLFGTLSLW QGVDVPGPSL SLVLIDRIPF PRPDDPLLTA RQRAVTAHGG NGFMAVAASH 
AALLLAQGAG RLLRRTDDRG VVAVLDSRMA TARYSGYLRA SLPPFWATTD PARVRAALER 
LRAGS