Gene Mmcs_3640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3640 
Symbol 
ID4112472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand+ 
Start bp3886153 
End bp3886800 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content66% 
IMG OID638032778 
Productoligoribonuclease 
Protein accessionYP_640803 
Protein GI108800606 
COG category[A] RNA processing and modification 
COG ID[COG1949] Oligoribonuclease (3'->5' exoribonuclease) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.00635145 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGTGACG AACTGGTGTG GATCGACTGC GAGATGACCG GCCTGGATCT GAGGTCGGAT 
CTGCTCATCG AGATCGCGGT GCTGGTCACC GATGCCGACC TGAACATCCT CGGCGACGGG 
CTCGACGTGG TGATCCACGC GCCCGACGAG GCGCTCGACG CCATGATCCC GGTGGTGACC 
GAGATGCACA CCCGCTCGGG GCTGATCGAG GAGGTGCGTG CCTCCACGGT CGACCTCGCG 
ACGGCCGAGG AGATGGTGCT CGACTACATC CGCGGGCACG TCAAACAGGC CAAGACGGCG 
CCGCTGGCCG GGAACTCGAT CGCCACCGAC CGCGGGTTCA TCGCCCGCGA CATGGCCAAA 
CTCGACGACT ATCTGCACTA CCGAATGATC GACGTCAGCT CGATCAAGGA GTTGTGCCGC 
CGGTGGTATC CGCGGATCTA CTTCGGTCAG CCCGAGAAAG GTCTTGCGCA CCGCGCGCTG 
GCCGACATCC ACGAGTCGAT CCGCGAGCTG AAGTACTACC GGCAGACGGC GTTCGTCGCT 
CCGCCCGGCC CGTCGACCAG CGATATCGCC GCGATCGCCG CCGAGCTCGG CCCGCCCGGC 
AAGGACGCGG CGGATACCGA TTCGGCCGCA GGGCACACGA CCGGTTAA
 
Protein sequence
MRDELVWIDC EMTGLDLRSD LLIEIAVLVT DADLNILGDG LDVVIHAPDE ALDAMIPVVT 
EMHTRSGLIE EVRASTVDLA TAEEMVLDYI RGHVKQAKTA PLAGNSIATD RGFIARDMAK 
LDDYLHYRMI DVSSIKELCR RWYPRIYFGQ PEKGLAHRAL ADIHESIREL KYYRQTAFVA 
PPGPSTSDIA AIAAELGPPG KDAADTDSAA GHTTG