Gene Mmcs_3625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3625 
Symbol 
ID4112457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp3869970 
End bp3871019 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content69% 
IMG OID638032763 
Producttransketolase, central region 
Protein accessionYP_640788 
Protein GI108800591 
COG category[C] Energy production and conversion 
COG ID[COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.295636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAAC TCATCGAACG GCCCACCGGC GCAGACGATC ACGACCGGTT CTTCACCGAC 
GTCCCGACCG TCACCGAACT GACCATGGTG CAGGCCATCA ACCGGGCTTT ACACGATGCG
ATGGCCGCCG ACGACCGCGT GCTGGTCTTC GGGGAGGACG TCGCGACCCT CGGCGGGGTG
TTCCGGGTGA CCGACGGCCT GTCCGAGACC TTCGGTGAGC AGCGGTGTTT CGATACGCCG
CTGGCCGAGT CGGCGATCGT CGGCATCGCG ATCGGGATGG CGATCCGCGG TTTCGTCCCG
GTGCCCGAGA TCCAGTTCGA CGGGTTCGCC GCACCGGCGT TCGACCAGGT GGTCAGCCAC
CTCGCCAAGT ACCGGATGCG CACCCGCGGC GATGTCGACA TGCCGGTGAC CATCCGCATC
CCGTCGTTCG GCGGAATCGG TGCGGTGGAA CATCATTCGG AATCGACCGA GACGTACTGG
CTGCACACCG CGGGCCTCAA GGTCGTGACA CCGTCGAGTC CGACCGACGC GTACTGGCTG
CTGCGGCACG CGATCGCCGC CCGCGACCCG GTGATCTACC TGGAACCGAA ACGACGGTAC
TGGGCGCGGG GGGCCGTGGA CACCACCGAG CCCGGCCTGC CGATCGGGCG GGCCGCAGTG
CGCCGCGAGG GCACCGACGT CACGGTCCTC ACGTACGGGC CGCTGGTCGC GACGGCGCTG
TCCGCCGCCG AACACGCCGC GGCTGAGTCG GACTGGTCGC TGGAGGTCGT CGATCTGCGG
TCGCTCAACC CGCTCGACTT CGACACCGTG GCGGCGTCGG TGGGCAAGAC GGGCCGCGCG
GTGGTGATGC ACGAGGGTCC GCGGACACTG GGCTTCGGCG CCGAACTGGC GGCACGGATC
TCCGAGGAGC TGTTCTACGA CCTGGAGGCG CCGGTGTTGC GCGCCACCGG GTTCGACACC
CCGTATCCAC CGGCCCGGCT GGAGAAGCTG TGGTTACCGG GGGTGGACCG GTTGCTCGAC
TGCGTCCAGC GGACCCTGGA GATGCCATGA
 
Protein sequence
MTQLIERPTG ADDHDRFFTD VPTVTELTMV QAINRALHDA MAADDRVLVF GEDVATLGGV 
FRVTDGLSET FGEQRCFDTP LAESAIVGIA IGMAIRGFVP VPEIQFDGFA APAFDQVVSH
LAKYRMRTRG DVDMPVTIRI PSFGGIGAVE HHSESTETYW LHTAGLKVVT PSSPTDAYWL
LRHAIAARDP VIYLEPKRRY WARGAVDTTE PGLPIGRAAV RREGTDVTVL TYGPLVATAL
SAAEHAAAES DWSLEVVDLR SLNPLDFDTV AASVGKTGRA VVMHEGPRTL GFGAELAARI
SEELFYDLEA PVLRATGFDT PYPPARLEKL WLPGVDRLLD CVQRTLEMP