Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_3472 |
Symbol | |
ID | 4112304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 3694732 |
End bp | 3699846 |
Gene Length | 5115 bp |
Protein Length | 1704 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 638032607 |
Product | beta-ketoacyl synthase |
Protein accession | YP_640635 |
Protein GI | 108800438 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities [COG3321] Polyketide synthase modules and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.185885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAGGG ACTTAGGCAA GGCTAACCAA TTGGCACCCG GCCTCCCCGA ACCCGTCGCG ATCGTCGGCA TCGGCTGCCG GCTGGCCGGC GACATCACGA CCCCCGCGGA CTTCTGGACG TTCCTGCTCG ACGGGGGCAG TCGCGTGCGC GAGGTGCCCG CGGACCGCTG GGAGCCCTAT CTGCGGCGCG ACCCCCGCAA CGCCGCGGTG CTGCGGGAGA CGACGCCGTG GGGCACCTTC CTCGACGACC TGGCCGGTTT CGACGCCGAA TTCTTCGGTG TCTCACCGCG TGAAGCCGAA CTGATGGATC CGCAGCAGCG ACTGGCGCTC GAAGTCTCGT GGGAGGCACT CGAACACGCC GGGGTTCCGC CGCGCTCGCT GGCCGGCAGC GACACCGCGG TGCTGATGGG CGTGAACTCC GACGACTACG GCAAGCTCAT CATGGAGGAC CTGCCGGGGA TCGAGGCGTG GACCGGGATC GGCACGTCGC TGTGCGGTAT CGCCAACCGC GTCTCGCACC TGCTCGATCT GCGCGGCCCC AGCGTCGCAC TCGATGCGGC GTGCGCGGCC TCGCTGGTGG CCGTGCACCA GGCGTGCCAA CTGCTGCGGA CGGGGGAGAC GTCGCTGGCG CTCGCCGGCG GTGTCAGCGC ACTGATCGGG CCCGGTCTGA CCCGGGTCCT CGACCAGGCG GGGGCGACCG CGCCCGACGG CCGGTGCAAG AGCTTCGACG CCGACGCCGA CGGCTACGGC CGCGGTGAGG GCGCCGCGGT CGTGGTGCTC AAGCGGTTGG CCGACGCCGT GCGGGACGGT GACCGGGTGA TCGCCGTCGT CCGCGGTGGG GCGGTGGCCC AGGACGGACG CACGGTCGGC ATCATGTCGC CCAACGGCGC CGCCCAGGAG GACCTGTTTC GGCGCACCTG TGCGACCTCC GGAATCGACC CGGCGACAGT CGGATTCGTC GAGGCGCACG GGACCGGCAC GCCGACCGGC GATCCGGTCG AACTCGACGC GCTCGCCGCC GTGTACGGGG CGCGGCGGGC CGACGGTGAA CCGTGCCGCG TCGGATCGGT CAAACCCAAC ACCGGTCACC TCGAGGGCGG GGCCGGGGTG GTGGGGTTGA TCAAGGCGGC GATGGCGCTG CAGCACGAGG CGATCCCCCC GACCGCCGGC GTCCGCACAC TCACCCCGGC CGTGGACTGG GCGTCGAGTG GACTGCGGGT TCCGACCCGG GTCGAGGCGT GGCCGCGTCG CGACGATGTC GCGCGCCGGG CCGCGGTGTG CAGCTACGGC TACGGCGGCA CCATCGCCCA TGTCCTGCTG GAAGAGGCGC CGGTAGCCGT ACGCCCGGAG GCGGAGGCGG ACGCCGAACC CGTGGTCGTC CCGCTGTCGG GGCGGTCGTC CGCGCGCCTG ACCCGCCACG CCGCCGCTCT CGCCGATCAC CTTCGGCGGC AACCACATTC GGTGGGAGAG GTGGCCGCGA CCCTGTGGGC GCGGCGCTCC CACGAACCGG TGCGCGCCGC GGTGATCGCA CACGACGGCG CCGACCTGGT GACCGGGCTC GACGCGCTCG CCGACGACCG CCCGACACCG TCGGTTCTCA CCGGCAACGT ACTCGCGGGT GCGGCCGACG GTGCGGTGTG GGTGTTCTCC GGACACGGAT CGCACTGGCC CGGCATGGGT CGCGAACTGC TCTCGCACGA ACCGGCTTTC GCGGCGGTCA TCGACGCGGT GGAACCGGTG TTCGCCGCCG AACTCGGGTT CTCGCCGCGT GCCGCGCTGC ACAGCGGTGA CCTCGGCGGA ACCGATCGGG TGCAGGCGCT GACGTTCGCG ATGCAGGTCG GCCTGGCCGC GGTGCTGCGC GAGCGCGGTC TGCGTCCGGC CGCGGTGATC GGCCACTCCG TCGGTGAGGT GGCCGCCAAC GTCGTCGCCG GTGTCTTCGA CCTCGCCCAC GGGGCCGCGG TGGCCTGCTA CCGCGCACGG GGCTTCCGAT CGGTGGCCGG CGCGGGGGCG ATGGCCCTGG TCCGTCTTCC CTTCGCCGAG GCCGACCGGC GCCTCGGCGA CCGCACCGAT GTGGTGGCGG CGATCAGCGC CTCACCGGAG TCGACGGTCA TCTCGGGCAC CGTCGAAGCG GTCGATGAGG TGTCGGCGCG CTGGACCGAC GAGGGGATGA CGGTGCGCCG GGTGAACACC GACGTGGCGT TCCACAGCCC GGCGATGGAC GGATTGACCG CCGAACTCGC CCGTCTCACA GCAGGTCTGG CGCCGACGAA GTCCGCCGGC ATGCCGCTGT ACTCCACCGC GCTGCCCGAC CCCCGCTCGA CCGCGCCACG CGACCCCGAC TACTGGGTGG CCAACCTGCG TGGCCGGGTG CGCTTCGCCG AAGCCGTGAC CGCCGCGGCC GAGGACGGAC ACCGGCTGTT CCTCGAGGTG TCGGCGCATC CGGTGGTCGC GCACTCCATC GCGGAGACGC TGGCGCACCA CGCGATCGAC GACCACGCGG TCGTGCCGGT GCTGCGGCGC GAACAGCCCG AGCTGCCTGC CGTCGCCGCC GCCGTCGGAG CGCTGTACTG CCACGGCGCA CCGGTCGCGC ACCGGGTCGA CACCGAAAAA CCCTGGGCCG CGGATCTTCC CGGAACGCAG TGGGTGCACC GGCGACACTG GCGCACGCCC GCCGCACCCC CTGGCGGTCG CGGTGTGCAC GAGCCGGATT CGCACACCCT GCTCGGCGGT CCGATGGAGG TGACGGGGGC GGTGCCCGCA CGGGTGTGGC AGACACGGCT GGACTTGTCG ACGCGGCCCT ACCCGGGCGA CCACCCGGTG CAGGGCACCG AGATCGTGCC CGCCGCCGTG TTGCTGAACA CGTTCCTGGC CGCGGCCGGA ACCGATCTGG CCGACGTGCG GTTGCGCACA CCCGTGCCGC CGGCACGTGC GCGCGACATC CAGGTGGTGT CGCAGGACCG CTCGCTGGCC CTGGCGTCCC GGGTGGTCGA CGACGGCGAG GACGCCGACG GTGGCTGGTT GACCCACTGC ACCGCGCTGG CCGCGCCGGG TGGGGAACCC GCGCTGACCG TGCTCGACGA GGACGAGATC CGCGCGCGGT GTCCGGAGGT GTTGCCGTCG ACCCATGTCG TGGACACGTT GGCGACCCTC GGCGTGGCCG CGATGGGATT CGGTTGGCAG GTGCTCGACC TGCACCGCGG TGACGGTGAG CTCTTCGCCC GTGTCGCGGC CGACGTCGAC GGATCGACGC CGGCGACGTG GGCGGGACTG CTCGACGCCG CGACCTCGGC GGCCTCGACG ATCTTCGACG GCCCGCCGCG ACTGCGCATG CCCGCCCGGA TCGAACGGGT GCACGTCCAC GACAAACCAC CCGCCGTCGC GCTGCTGCAC GTACGCCGCC GCGAGGCGGG CACCGTCACC GACGTGGTAC TCGCCGAGGA GTCCGGTGCG GTCTCGGTGT CCTTGACCGG CATGGCATTC GAGGAGCTCG AGAATCCCAG CGGCCGCGAC ACGGCGCGGC TGTTGCACCA CGTCGCGTGG CAACCGGTCG CATGGCCGGA CGCCGACCTG CCTGCCGAGG TGGTGCTCGT CGGCGGGGAC GCCGCTACGC GGGCCTTCGT CACCCGCGAC CTCGACGAGG CCGGTGTGCC GCACCGATCT GTCGGTCATG CAACGGAACT CGGTGCGCTC CCGAGCGGGT CGGTGGTGCT CGTGCTGCCG CGCGCCGACG AGACACCGCA GACGTCGGCC GAACTCGTGC TCAGCACCGT GCAGCATCTC GACGCGTCCG GTGCTCGAAC CAGGTTGTGG GTGCTGACCT CCGACGTGCA CGAAGGCGTC AACCCGGCGC ACGCCCCGCT GTGGGGAATG GCGCGGGTGG CGGCGGCCGA ACATCCACAC CTGTGGGGCG GCGTGCTCGA CATCACCGGG GACCGGTTGC CGGTGCGGGC GCTCGGCGCG CTGCACGGGC ACGGTGTGGT GGTGGTGCGC GACGGCGTCG CGTACGCGGC GCGGTTGGCC CACGCCGGAC CGGGGGAGGC GGCGCCGCTG CAGTGCTCGC CGGGCGGTAC CTACCTGATC ACCGGCGGCA CCGGCGTGCT GGGGCTGCGG CTGGCGCAGC GCCTGGCCGA CCTGGGGGCG CGGCGGCTGG TGCTGGTGTC GCGGTCTGGC ATTCCCGAGC GCAGCGCATG GCGCGACCAC AGCGACCGGG AAGTGGTCGC CGTGGTCTCC GCCCTCGAAC AGCGGGGGGT GTCGGTGAAG GTGGCGGCCG TCGACGTCGG CGCACCCGCA GCGGCCACCG CGCTGCGGTC GGCGCTGGTC GACCTGCCGC CGGTGCGCGG AGTCATCCAC GCCGCGGGCG TGGAAGCCGG TGCGCTGCTG GCCACGACGA CCGCGGACGA TCTCGACGCG GCGATGCGGC CGAAGGTCGC CGGGCTCAAC ACGCTGCACG AGCTGTTCCC GCCCGGCGAG CTGGATTGGA TGGTGCTGTT CTCGTCGTGC GGCTATCTGG CGGGCTTCCC CGGCCAGGGT GCCTACGCGT GCGGCAACGC CTACCTCGAC GCCTTCGCCC GCCACCGCCG CCGCCTCGGC GACCGGACCA CCAGCGTCGC GTGGACGGCG TGGCGGGGTA TGGGCATGGG CTCGGCCTCC GGATTCGTCG CCGCCCAGCT CGACGCGCTC GGGATGGGCA CGGTGGGACT CGACGACGCG ATGCGGGCGC TGGACTCGGC GATGCGCGAC GACGACCCCA ACGTGGTGGT GTTGCCGGTG CTGCCGTCGG CGGCATCGGT GCCGATCCTC GCCGACGTCG CGCCCACCGA ATCCGCGGAG CCGGTCGCGG ACCGCGGTGA TGAGGACGTC GCGGAGTGGG CGGCTCGCCA GGTGCTCACC GCGGTCTCCT CCGAACTCGG TTGCGCCGCA GATGATGTCG ACCTACGGCT GCCGTTGGTG GAGATCGGTG TCGACTCCAT CATGACCGTC GCCCTGCGGC GCCGGCTGGA GAAGCAGACC GGGCTGTCGC TGCCGCCGAC GCTGCTGTGG GAGTACCCGA CCGCCGCGGC GGTGACCGAC CGGATCACCG AACTGCTGAC CGTCGAGGAC GATTCGGCCG CATAA
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Protein sequence | MSRDLGKANQ LAPGLPEPVA IVGIGCRLAG DITTPADFWT FLLDGGSRVR EVPADRWEPY LRRDPRNAAV LRETTPWGTF LDDLAGFDAE FFGVSPREAE LMDPQQRLAL EVSWEALEHA GVPPRSLAGS DTAVLMGVNS DDYGKLIMED LPGIEAWTGI GTSLCGIANR VSHLLDLRGP SVALDAACAA SLVAVHQACQ LLRTGETSLA LAGGVSALIG PGLTRVLDQA GATAPDGRCK SFDADADGYG RGEGAAVVVL KRLADAVRDG DRVIAVVRGG AVAQDGRTVG IMSPNGAAQE DLFRRTCATS GIDPATVGFV EAHGTGTPTG DPVELDALAA VYGARRADGE PCRVGSVKPN TGHLEGGAGV VGLIKAAMAL QHEAIPPTAG VRTLTPAVDW ASSGLRVPTR VEAWPRRDDV ARRAAVCSYG YGGTIAHVLL EEAPVAVRPE AEADAEPVVV PLSGRSSARL TRHAAALADH LRRQPHSVGE VAATLWARRS HEPVRAAVIA HDGADLVTGL DALADDRPTP SVLTGNVLAG AADGAVWVFS GHGSHWPGMG RELLSHEPAF AAVIDAVEPV FAAELGFSPR AALHSGDLGG TDRVQALTFA MQVGLAAVLR ERGLRPAAVI GHSVGEVAAN VVAGVFDLAH GAAVACYRAR GFRSVAGAGA MALVRLPFAE ADRRLGDRTD VVAAISASPE STVISGTVEA VDEVSARWTD EGMTVRRVNT DVAFHSPAMD GLTAELARLT AGLAPTKSAG MPLYSTALPD PRSTAPRDPD YWVANLRGRV RFAEAVTAAA EDGHRLFLEV SAHPVVAHSI AETLAHHAID DHAVVPVLRR EQPELPAVAA AVGALYCHGA PVAHRVDTEK PWAADLPGTQ WVHRRHWRTP AAPPGGRGVH EPDSHTLLGG PMEVTGAVPA RVWQTRLDLS TRPYPGDHPV QGTEIVPAAV LLNTFLAAAG TDLADVRLRT PVPPARARDI QVVSQDRSLA LASRVVDDGE DADGGWLTHC TALAAPGGEP ALTVLDEDEI RARCPEVLPS THVVDTLATL GVAAMGFGWQ VLDLHRGDGE LFARVAADVD GSTPATWAGL LDAATSAAST IFDGPPRLRM PARIERVHVH DKPPAVALLH VRRREAGTVT DVVLAEESGA VSVSLTGMAF EELENPSGRD TARLLHHVAW QPVAWPDADL PAEVVLVGGD AATRAFVTRD LDEAGVPHRS VGHATELGAL PSGSVVLVLP RADETPQTSA ELVLSTVQHL DASGARTRLW VLTSDVHEGV NPAHAPLWGM ARVAAAEHPH LWGGVLDITG DRLPVRALGA LHGHGVVVVR DGVAYAARLA HAGPGEAAPL QCSPGGTYLI TGGTGVLGLR LAQRLADLGA RRLVLVSRSG IPERSAWRDH SDREVVAVVS ALEQRGVSVK VAAVDVGAPA AATALRSALV DLPPVRGVIH AAGVEAGALL ATTTADDLDA AMRPKVAGLN TLHELFPPGE LDWMVLFSSC GYLAGFPGQG AYACGNAYLD AFARHRRRLG DRTTSVAWTA WRGMGMGSAS GFVAAQLDAL GMGTVGLDDA MRALDSAMRD DDPNVVVLPV LPSAASVPIL ADVAPTESAE PVADRGDEDV AEWAARQVLT AVSSELGCAA DDVDLRLPLV EIGVDSIMTV ALRRRLEKQT GLSLPPTLLW EYPTAAAVTD RITELLTVED DSAA
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