| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3433 |
|---|
| Symbol | |
|---|
| ID | 4112265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 3643865 |
|---|
| End bp | 3645076 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638032567 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_640596 |
|---|
| Protein GI | 108800399 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0912154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCGCC AACCCAAAGC CGTCTGGGCC GTAGCCTTCG CCTCCGTCGT GGCGTTCATG
GGCATCGGCC TCGTCGACCC CATCCTCAAA CCGATCGCCG ACAACCTGAA CGCCTCCCCG
TCCCAGGTGT CGTTGCTGTT CACCAGCTAC ATGGCCGTGA TGGGGGTGGC GATGCTGATC
ACCGGCGTCG TCTCCAGCCG CATCGGCCCC AAGCGCACCC TGCTGCTCGG TCTGGTCGTG
ATCATCGCCG GCGCCGGTCT GGCCGGGATG AGCGGCACGG TCATGGAGAT CGTCGGATGG
CGCGCGCTGT GGGGTCTGGG CAACGCCCTG TTCATCGCGA CCGCGCTGGC CACGATCGTC
AACTCGGCGC GTGGCTCGGT GGCGCAGGCG ATCATCCTGT ACGAGGCCGC ACTCGGCCTC
GGTATCGCCG TCGGCCCACT CGTCGGCGGT CTGCTCGGTG AAATCTCTTG GCGCGGGCCA
TTTTTCGGCG TCTCGGCGCT CATGGTCGTC GCCGTGGTGG TCACCGCGAT CCTGCTGCCG
CCGACGCCGC GGCCGGAGCG GGCCACCACG CTGGCCGATC CGTTCCGCGC GCTGCGGCAC
CGCGGTCTGC TCGGCACGTC GATCACCGCG CTGCTCTACA ACTTCGGGTT CTTCACCCTG
CTCGCGTTCA CCCCGTTCCC CTTGGACATG TCCGCACAGC AGATCGGGCT GATCTTCTTC
GGGTGGGGGG TGGCGCTCGC GTTCACCTCG GTGGTCGTAG CGCCCCGGTT GCAGCACCGG
TTCGGCACCG TGCCCACACT GATCGTCAAC CTGCTCGCGA TGACGGCGAC GTTGGTCGTG
ATGGCGATCG GCACCGACAG CAAGGCAGTG CTGGCGACCT GTGTCGTGGT GGCCGGCCTG
TTCATCGGCG TCAACAACAC GCTGATCACG GAGACGGTGA TGAAGGCCGC CCCGGTCGAA
CGCGCGGTCG CGTCGGCCGC CTACAGCTTC CTGCGGTTCG GCGGTGCGGC CGTCGCCCCG
TGGCTGGCCG GTGTGCTCGG TGAGCAGGTC GACGTCCACC TCCCCTACTG GGTCGGCGCG
GGCGCGGTGC TGGCGGCCGC CGTCGTGCTG ACCGCCACCC GCGGACACCT GCGCGGTATC
GACGTCGAGG AAGACGAGCT CACCGAACGC ACCGACGAGG CCCGAGCCGT GACGGTCGGA
AGCGAGACCT AG
|
|---|
| Protein sequence | MWRQPKAVWA VAFASVVAFM GIGLVDPILK PIADNLNASP SQVSLLFTSY MAVMGVAMLI
TGVVSSRIGP KRTLLLGLVV IIAGAGLAGM SGTVMEIVGW RALWGLGNAL FIATALATIV
NSARGSVAQA IILYEAALGL GIAVGPLVGG LLGEISWRGP FFGVSALMVV AVVVTAILLP
PTPRPERATT LADPFRALRH RGLLGTSITA LLYNFGFFTL LAFTPFPLDM SAQQIGLIFF
GWGVALAFTS VVVAPRLQHR FGTVPTLIVN LLAMTATLVV MAIGTDSKAV LATCVVVAGL
FIGVNNTLIT ETVMKAAPVE RAVASAAYSF LRFGGAAVAP WLAGVLGEQV DVHLPYWVGA
GAVLAAAVVL TATRGHLRGI DVEEDELTER TDEARAVTVG SET
|
|---|
| |