Gene Mmcs_3223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3223 
Symbol 
ID4112055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand- 
Start bp3414290 
End bp3414976 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content65% 
IMG OID638032355 
ProductTetR family transcriptional regulator 
Protein accessionYP_640386 
Protein GI108800189 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGTCAT GTGCGTGGGC AAGTCACAAT GGTGTGCGCT CGCGGCATAC TGGCTGTGTG 
TCGACGAGGT TGTTGAGATG GGGCGCCGCC GCGCCGACAG ATCGTGGGTC CGCTCGCGAC 
CGGTTGCTCG ATGCTGCCGA GCGGTGCCTC GAGAGTTGCG GTGTGGTGGG CACGACCATG 
GAGGACATCG GCAGAACAGC GGGTGTGTCC AGGGCAACGG TGTATCGCTA CTTCCCCAGT 
CGGGAGGCGG TGATGTCGGG TGTCATCATT CGCGCCGCCG AGCGCTATCT CGACCGCATC 
AGCCCGCGGA TCGCGGCGCA CGCCGACCTG GGCTCCGCGC TCGTCGATTT CGTGGAATAC 
ACGGTTGAGG CCGCGCGCCG CGAAGAGATC ATCGGATTGT TGTTCGGCAG CGACGAGGAA 
CTCGCCGGCG TGGGTCTCGC GGCGGGGACC TCGACGTCCC TCTTCGAAAT CGTCACCGAA 
TTTCTGCGTC CCATCTTCAC CAGACACTGG AGTTGCGTGG AACCGGGCGT CTCCGTCGAC 
GACGCCGCCG AGTGGGTTGT CCGCACGATA TTGAGCCTGC TGACTGTTCG AGGGCCGCGG 
GAGCGCAGTC GTGACGGACT CCGGGCGTTT CTGTCGAGGT TTCTCCTTCC GGCGATCCTG 
GCGGGTGACC ACGCTCGACC GATGTGA
 
Protein sequence
MVSCAWASHN GVRSRHTGCV STRLLRWGAA APTDRGSARD RLLDAAERCL ESCGVVGTTM 
EDIGRTAGVS RATVYRYFPS REAVMSGVII RAAERYLDRI SPRIAAHADL GSALVDFVEY 
TVEAARREEI IGLLFGSDEE LAGVGLAAGT STSLFEIVTE FLRPIFTRHW SCVEPGVSVD 
DAAEWVVRTI LSLLTVRGPR ERSRDGLRAF LSRFLLPAIL AGDHARPM