| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3122 |
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| Symbol | |
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| ID | 4111954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | - |
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| Start bp | 3313373 |
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| End bp | 3315655 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638032252 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_640285 |
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| Protein GI | 108800088 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.203405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGTCA ACGATGTCGC CGGCAAGCCG GCTCCGGAAA CCACCGGCAT CGGCAGCTTC
GCCGACGTAC CGCTGCACGG TGAAGGCGCC GGCGCACCCG CGACCGAGGC CGCCGTCGCC
GCACACATCG AGGCCGCGGC CGCCGCGCAC GGGTACACCC CCGAGCAACT CGACTGGGTG
ACGCCGGAGG GCATCGACGT CAAACCGGTC TACGTCGCCG CCGACCGCGC CGCCGCCGCC
TCGGCCGGAT ACCCGCTCGA CTCGTTCCCT GGCGCACCGC CGTTCCTGCG CGGGCCGTAC
CCGACGATGT ACGTCAACCA GCCCTGGACC ATCCGCCAGT ACGCCGGCTT CTCGACCGCC
GCGGAGTCCA ACGCGTTCTA CCGCCGCAAC CTGGCCGCGG GCCAGAAGGG CCTCTCGGTG
GCCTTCGACC TGGCCACCCA CCGCGGCTAC GACTCCGACC ACCCGCGGGT GCAGGGCGAT
GTGGGCATGG CCGGGGTGGC CATCGACTCC ATCCTCGACA TGCGCCAGCT CTTCGACGGC
ATCGACCTGT CGACGGTGTC GGTGTCGATG ACCATGAACG GCGCGGTGCT GCCGATCCTG
GCGCTCTACG TCGTGGCCGC CGAGGAGCAG AGGGTGCCGC CGGAGAAGCT GGCGGGGACC
ATCCAGAACG ACATCCTCAA AGAGTTCATG GTCCGCAACA CCTACATCTA TCCGCCCAAG
GCGTCGATGC GGATCATCAG CGACATCTTC GGTTACACCA GCACCAAGAT GCCGAAGTTC
AACTCGATCT CGATCTCCGG CTACCACATC CAGGAGGCCG GGGCGACGGC CGATCTGGAG
CTGGCCTACA CGCTGGCCGA CGGCGTCGAG TACATCAAGG CCGGCCTGGA CGCCGGGCTC
TCGATCGACA AGTTCGCGCC GCGACTGTCC TTCTTCTGGG GCATCGGGAT GAACTTCTTC
ATGGAGGTCG CCAAGCTGCG CGCCGGCCGA CTGCTGTGGA GCGAACTGGT CGCCGAGTTC
GACCCGAAGA ACGAGAAGTC GCTGTCGCTG CGCACCCACT CGCAGACCTC GGGCTGGTCG
CTGACCGCAC AGGACGTGTT CAACAACGTC GCCCGCACCT GCATCGAGGC GATGGCCGCC
ACCCAGGGGC ACACGCAGTC GCTGCACACA AACGCCCTCG ATGAGGCGCT CGCGCTGCCG
ACCGACTTCT CGGCCCGCAT CGCGCGCAAC ACCCAGCTGC TGCTGCAGCA GGAGTCCGGA
ACCACCAGGC CGATCGACCC ATGGGGTGGG TCGTACTACG TCGAGTGGCT GACCCACCAG
CTGGCCACCG CCGCTCGGAT GCACATCGGT GAGGTCGTCG CCCACGGCGG AATGGCGCAG
GCGATCAGCG AGGGCATCCC GAAGCTGCGC ATCGAGGAGG CCGCGGCCCG CACCCAGGCC
CGTATCGACT CCGGCGCGCA GACCGTCATC GGCGTCAACA AGTACCAGGT GACCGAGGAC
CACGAGATCG AGGTGCTCAA GGTCGAGAAC AGCCGGGTGC GCGCCGAGCA GCTCGCCAAG
CTGCAGCAGT TGCGCGCCGA CCGTGACGAG GACGCGACCC GCGCCGCGCT CGACGAGCTG
ACCCGGGCGG CCGGTGCGCA GGGGTCAGCC GGGGAGGACG GGCTGGGCAA CAATCTGTTG
GCGCTCGCGA TCAACGCCGC CCGCGCCAAG GCGACCGTGG GGGAGATCTC CGACGCACTG
GAGAAGGTCT ACGGCCGCCA CGTCGCCGAG ATCCGCACGA TCTCCGGCGT CTACCGCGAC
GAAGCCGGGA AGGCCACCAA CATCTCTTCC GCAACCGAAC TCGTGGAGAA GTTCGCCGAG
GCCGACGGCC GCCGACCCCG CATCCTGGTC GCCAAGATGG GGCAGGACGG CCACGACCGC
GGCCAGAAGG TCATCGCGAC GGCCTTCGCC GACATCGGTT TCGACGTCGA TGTGGGTTCG
TTGTTCTCCA CGCCCGACGA GGTCGCCCAG CAGGCCGCCG ACAACGACGT GCACGTCGTC
GGTGTCTCGT CGCTGGCCGC CGGTCACCTC ACGCTGGTGC CCGCGCTGCG CGACGCGCTG
GCCGCGGTCG GCAGGCCCGA CATCATGGTG GTGGTCGGCG GGGTCATCCC GCCCGGCGAC
TTCGACGAGC TCTACGCCGC AGGGGCCGCC GCCATCTTCC CGCCGGGCAC CGTGATCGCC
GACGCCGCGA CCGGGCTGCT GCACAAACTC GCCGAACGGC TCGGCTACGA CCTGAACGCC
TGA
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| Protein sequence | MTVNDVAGKP APETTGIGSF ADVPLHGEGA GAPATEAAVA AHIEAAAAAH GYTPEQLDWV
TPEGIDVKPV YVAADRAAAA SAGYPLDSFP GAPPFLRGPY PTMYVNQPWT IRQYAGFSTA
AESNAFYRRN LAAGQKGLSV AFDLATHRGY DSDHPRVQGD VGMAGVAIDS ILDMRQLFDG
IDLSTVSVSM TMNGAVLPIL ALYVVAAEEQ RVPPEKLAGT IQNDILKEFM VRNTYIYPPK
ASMRIISDIF GYTSTKMPKF NSISISGYHI QEAGATADLE LAYTLADGVE YIKAGLDAGL
SIDKFAPRLS FFWGIGMNFF MEVAKLRAGR LLWSELVAEF DPKNEKSLSL RTHSQTSGWS
LTAQDVFNNV ARTCIEAMAA TQGHTQSLHT NALDEALALP TDFSARIARN TQLLLQQESG
TTRPIDPWGG SYYVEWLTHQ LATAARMHIG EVVAHGGMAQ AISEGIPKLR IEEAAARTQA
RIDSGAQTVI GVNKYQVTED HEIEVLKVEN SRVRAEQLAK LQQLRADRDE DATRAALDEL
TRAAGAQGSA GEDGLGNNLL ALAINAARAK ATVGEISDAL EKVYGRHVAE IRTISGVYRD
EAGKATNISS ATELVEKFAE ADGRRPRILV AKMGQDGHDR GQKVIATAFA DIGFDVDVGS
LFSTPDEVAQ QAADNDVHVV GVSSLAAGHL TLVPALRDAL AAVGRPDIMV VVGGVIPPGD
FDELYAAGAA AIFPPGTVIA DAATGLLHKL AERLGYDLNA
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