Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_3048 |
Symbol | |
ID | 4111880 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 3223899 |
End bp | 3226763 |
Gene Length | 2865 bp |
Protein Length | 954 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638032178 |
Product | prolipoprotein diacylglyceryl transferase |
Protein accession | YP_640211 |
Protein GI | 108800014 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG0682] Prolipoprotein diacylglyceryltransferase [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain |
TIGRFAM ID | [TIGR00544] prolipoprotein diacylglyceryl transferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.814492 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACGAGCA CGCTGGCCTA CATTCCCAGT CCGCCGCAGG GCGTGTGGGA GCTCGGGCCG TTCCCGCTGC GCGCGTACGC GCTGTGCATC ATCGCGGGCA TCATCGTCGC GTTGGTCCTG GGCGACCGCC GCTGGGAGGC GCGCGGCGGC GAGCGCGGCG TCATCTACGA CATCGCCCTG TGGGCGGTGC CGTTCGGGCT GATCGGTGGC CGGCTCTACC ACGTCATCAC CGATTGGCAG ACGTACTTCG GGCCCGACGG CGCCGGGCTG ATCGCGGCGT TCCGCATCTG GGAGGGCGGC CTTGGCATTT GGGGCGCGGT GGCGCTCGGC GGGGTCGGGG CCTGGATCGC CTGCCGTCGT CGCGGCATCC CGCTGCCCGC CTTCGGCGAC GCCATCGCGC CCGGCATCAT CCTGGCGCAG GCGATCGGCC GGCTCGGCAA CTACTTCAAT CAGGAGCTCT ACGGCCGCGC GACGACGGTG CCGTGGGGGC TCGAGATCTA CGAGCGGGTC GATGCCAGCG GTGCGCGCAA TGACCTGATC GGGGTGTCGA CGGGCCGCGT CATCGAGATC GTGCACCCCA CCTTCCTCTA CGAATTGGTG TGGAACCTGC TGGTTTTCGC GGTTCTCATC TGGGCGGACC GGCGGTTCAA CCTGGGGCAC GGCCGGCTGT TCGCGCTGTA CGTCGCGGGC TACTGCCTCG GCCGGTTCTG GATCGAGCTG CTGCGCAGTG ACATGGCCAC CGAGCTGGCG GGTATCCGGG TCAACTCGTT CACGTCGATG TTCGTGTTCA TCGGAGCCGT GGTGTACCTG ATGGCGGCTC CGCGCGGCCG GGAGGACCCC GCGACGCTTC GGAGTGACGT GGATGAGGAG GTCGAAGCCG CGGCCGTCTC GCCGAACGAT TTCGAGGCCG ATGCGGTCGA ACCCGGCGAC ACCGACGAAG ACGACGCTGC GACCACAGCG CTGCTCAAAG AGGCCGCGGC CGCCACGGGT GTGGGGGTCG CCGCGAAAGT CGCGGGGGAC GACGACGCGA AGGACGAGGA CGTCCAGTCC GACACGGCGG AGCCGGTCGC CGAGGCCGAG GCGTTGGCTG AGGATGTCGA GTCGGCGCCG TCGGAGGACA TTGCCGAGGC GGTGGCGTTC GCGGACGCTG GTGAGGCCGC GGATCGTGAG CCGTTGACGA CGGCCGGTGT CGTTGAGGGT GAGGACGCGG TCGCGGCTGA GGAGTCGGCT GAAGAGGCGC ATGCGGCGGC GGTCGAAGGC GCCGAAGAAG CCGAAGCGGT CGCCGAGGAA GTCGCTGCTG AGGACAGGGC CCAGGAGACG CCCGCCGAAG CGCCGAGTGT GAAACCTTCG CGATTCTTGG GACGACTTTT CGCGAGAGCT TCACGCTCGG TGAAGCCGGA GCCCGCGGAA GCGGGCAAGG CTGCTGATCG TGAGCCGTTG ACGACGGCCG GTGCTGCCGA CGGCGGGCCC GATGAAGAAA TGCCGGAGCC GGTAGCCGAG GCGGAGGCAC TGGCGGAGGA CGTCGAGTCG GCGCCCTCGG AGGACATCGC TGAGGCGGTG GCGTTCGCGG AAGCCGGTGA GGCTGCCGAT GAGGAGCCTC CGGTCACTGT CGGTTCGGTC GAGGGTGAGG ATGCGGTCGC GGCTGAGGAG TCGGCCGAGG AGGCGCATGC GGCGGCGGTC GAGGGTGCCG CGGAGGCCGA GGCGCTCGCC GACGAAGTCG CTGTTGCGGA TGCTGGCGAG CCCGAGTCCC AGCCGGAGCC GGTGCCCGAG GTCGAGGCTG GTGAGGCGGC TGATCGTGAG GCGTTGACGA CCGCTCGTGT CGTTGAGGGT GAGGACGCGG TCGCGGCTGA GGAGTCGGCC GAGGAGGCGC ATGAGGCTGC GGTTGAGGGT GCCGCGGAGG CCGAGGCGCT CGCCGACGAA GTCGCTGTTG CAGATGCTGG CGAGCCTGAG CCTGAAGGCG AGCCGGAGTC GGTGGCGGAG CCTGAGGCGG TTGCCGACGA GGTCGCCGAT GACACGGCGG AGCCGGTGGC CGGGGTCGAG GCTGGTGAGG CTGGGGATCG TGAGCCGTTG ACGACGGCCG GTGCGGTTGA GGGTGGCGCG GAGGCTGAAG CGCTCGCCGA CGAAGTCGCC GGTGACATGG CGGAGCCGGT GGCCGAGGTC GGGGCTGGTG AGGCGGCTGA TCGTGAGGCG TTGACGACGG CTGGTGCGGT TGAGGGTGAG GACGCGGTCG CGGCTGAGGA GTCGGCCGAG GAGGCGCATG AGGCTGCGGT TGAGGGTGCC GCGGAGGCTG AAGCGCTCGC CGACGAGGTG GCTGCCGCGG AGCCCGAGGC GTTGGCCGAG GATGTCGAGT CGGCCCCGTC GGAGGACATC GCTGAGACCG CAGCGTTCGC TGACGCTGGT GAGGCGGCCG ATCGTGAGCC GTTGACGACC GCCGGTGCGG TCGAGGGTGC CGAGGAGGCC GAGGCCGTCG CCGAAGGGGG GCTCGACGAG GACCTCGAGG CGGCAGTGGA ACGGGCCGAC GAGGCCGAGG CGGTCGCGGA GGAGATCGCC GTCGCCGACG CCGAAGGGCA GTTCGCCGAC GACGAGCCCG TGGAGGACCG GGACGCCGAA GCCGTCGCCG GAGAGGTCGG CGCCGCCGAA GCGGAGGCGC TCGAAGACTC GGCCGTCGAG CAGGAGACCG CGCCCGACGA GACCGCCGAA CCGGTCGTCG ACGACGAAGA GTTGGCGGCA AGTGCGCAGG ATGCGCCTGG CGACGACGTC GCTGACATCG ACGAGGGCGG TGAGACCGAC GCGTCCGCCT ACCGGATCAT CACGACCCCC GAACCGGTTC CGACACGTCG CCGGTGGTTC CGCCGCCGCA AGTGA
|
Protein sequence | MTSTLAYIPS PPQGVWELGP FPLRAYALCI IAGIIVALVL GDRRWEARGG ERGVIYDIAL WAVPFGLIGG RLYHVITDWQ TYFGPDGAGL IAAFRIWEGG LGIWGAVALG GVGAWIACRR RGIPLPAFGD AIAPGIILAQ AIGRLGNYFN QELYGRATTV PWGLEIYERV DASGARNDLI GVSTGRVIEI VHPTFLYELV WNLLVFAVLI WADRRFNLGH GRLFALYVAG YCLGRFWIEL LRSDMATELA GIRVNSFTSM FVFIGAVVYL MAAPRGREDP ATLRSDVDEE VEAAAVSPND FEADAVEPGD TDEDDAATTA LLKEAAAATG VGVAAKVAGD DDAKDEDVQS DTAEPVAEAE ALAEDVESAP SEDIAEAVAF ADAGEAADRE PLTTAGVVEG EDAVAAEESA EEAHAAAVEG AEEAEAVAEE VAAEDRAQET PAEAPSVKPS RFLGRLFARA SRSVKPEPAE AGKAADREPL TTAGAADGGP DEEMPEPVAE AEALAEDVES APSEDIAEAV AFAEAGEAAD EEPPVTVGSV EGEDAVAAEE SAEEAHAAAV EGAAEAEALA DEVAVADAGE PESQPEPVPE VEAGEAADRE ALTTARVVEG EDAVAAEESA EEAHEAAVEG AAEAEALADE VAVADAGEPE PEGEPESVAE PEAVADEVAD DTAEPVAGVE AGEAGDREPL TTAGAVEGGA EAEALADEVA GDMAEPVAEV GAGEAADREA LTTAGAVEGE DAVAAEESAE EAHEAAVEGA AEAEALADEV AAAEPEALAE DVESAPSEDI AETAAFADAG EAADREPLTT AGAVEGAEEA EAVAEGGLDE DLEAAVERAD EAEAVAEEIA VADAEGQFAD DEPVEDRDAE AVAGEVGAAE AEALEDSAVE QETAPDETAE PVVDDEELAA SAQDAPGDDV ADIDEGGETD ASAYRIITTP EPVPTRRRWF RRRK
|
| |