Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_2897 |
Symbol | |
ID | 4111729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 3059019 |
End bp | 3059828 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638032021 |
Product | RNA polymerase sigma factor SigF |
Protein accession | YP_640060 |
Protein GI | 108799863 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.902875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATCA TTGACGACAC ACTCCAGGTG ACGGCCAAAA GGCCGTCCAC TCGTACCCAA GACGACTACA CCGATGTCCC GGACATGTTC CGCCTGCTGT CGGTATTGAG CCCCGGAACC CCGGATCACG ACCGGCAGCG TGAACGCATC GTGACGCGAT GCCTTCCGCT GGCCGACCAC ATCGCTTTCC GCTATCACCG CAAGGGCGAG AACCTCGACG ATCTCGTGCA GATCGCCCGA GTCGGGTTGA TGCATGCGGT GAACCGCTTC GATCCCGAGA ACGGCGCCAA CTTCCTGTCG TTCGCAGTGC CCACGATGCT CGGCGAGATC CGACGCCACT TCCGGGACAA CGGATGGGCG ATGCACGTCC CACGCCGGCT CAAGGATCTG CACGTGCAGA TCACCCGGGC GACCCCGCGG CTGACGCAGT CGCTCGGCCG TCCCCCCACA CCCACCGATC TGGCCGCCGA ACTCGGGGCC GACCGGCAGG AAGTGGTGGA GTGCCTGGTT GCCGGTGACG CGTACAGCCT GCGCTCGATC GACAGCCCCA TCTCATCGTC GGACGACACG ACGCGGTCGC TCGCCGACAC GCTCGGCGAG GTCGACGGGG AGATGGAGCA CATCACCGAC CGCGAGTCGC TGCGTCCGCT GCTGGCGGCG CTGACCGAAC GTGAGCGCAC TGTGATCAGT CTCAGGTTCT TCGCCTCGAT GACGCAGACG CAGATCGCCG AGCGAATCGG TGTCTCGCAG ATGCAGGTCT CGCGAATTCT CGCCAAGACA CTTCAGCAGT TGCGCGACGG GATGAGCTGA
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Protein sequence | MTIIDDTLQV TAKRPSTRTQ DDYTDVPDMF RLLSVLSPGT PDHDRQRERI VTRCLPLADH IAFRYHRKGE NLDDLVQIAR VGLMHAVNRF DPENGANFLS FAVPTMLGEI RRHFRDNGWA MHVPRRLKDL HVQITRATPR LTQSLGRPPT PTDLAAELGA DRQEVVECLV AGDAYSLRSI DSPISSSDDT TRSLADTLGE VDGEMEHITD RESLRPLLAA LTERERTVIS LRFFASMTQT QIAERIGVSQ MQVSRILAKT LQQLRDGMS
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