Gene Mmcs_2897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_2897 
Symbol 
ID4111729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp3059019 
End bp3059828 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content65% 
IMG OID638032021 
ProductRNA polymerase sigma factor SigF 
Protein accessionYP_640060 
Protein GI108799863 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.902875 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATCA TTGACGACAC ACTCCAGGTG ACGGCCAAAA GGCCGTCCAC TCGTACCCAA 
GACGACTACA CCGATGTCCC GGACATGTTC CGCCTGCTGT CGGTATTGAG CCCCGGAACC
CCGGATCACG ACCGGCAGCG TGAACGCATC GTGACGCGAT GCCTTCCGCT GGCCGACCAC
ATCGCTTTCC GCTATCACCG CAAGGGCGAG AACCTCGACG ATCTCGTGCA GATCGCCCGA
GTCGGGTTGA TGCATGCGGT GAACCGCTTC GATCCCGAGA ACGGCGCCAA CTTCCTGTCG
TTCGCAGTGC CCACGATGCT CGGCGAGATC CGACGCCACT TCCGGGACAA CGGATGGGCG
ATGCACGTCC CACGCCGGCT CAAGGATCTG CACGTGCAGA TCACCCGGGC GACCCCGCGG
CTGACGCAGT CGCTCGGCCG TCCCCCCACA CCCACCGATC TGGCCGCCGA ACTCGGGGCC
GACCGGCAGG AAGTGGTGGA GTGCCTGGTT GCCGGTGACG CGTACAGCCT GCGCTCGATC
GACAGCCCCA TCTCATCGTC GGACGACACG ACGCGGTCGC TCGCCGACAC GCTCGGCGAG
GTCGACGGGG AGATGGAGCA CATCACCGAC CGCGAGTCGC TGCGTCCGCT GCTGGCGGCG
CTGACCGAAC GTGAGCGCAC TGTGATCAGT CTCAGGTTCT TCGCCTCGAT GACGCAGACG
CAGATCGCCG AGCGAATCGG TGTCTCGCAG ATGCAGGTCT CGCGAATTCT CGCCAAGACA
CTTCAGCAGT TGCGCGACGG GATGAGCTGA
 
Protein sequence
MTIIDDTLQV TAKRPSTRTQ DDYTDVPDMF RLLSVLSPGT PDHDRQRERI VTRCLPLADH 
IAFRYHRKGE NLDDLVQIAR VGLMHAVNRF DPENGANFLS FAVPTMLGEI RRHFRDNGWA
MHVPRRLKDL HVQITRATPR LTQSLGRPPT PTDLAAELGA DRQEVVECLV AGDAYSLRSI
DSPISSSDDT TRSLADTLGE VDGEMEHITD RESLRPLLAA LTERERTVIS LRFFASMTQT
QIAERIGVSQ MQVSRILAKT LQQLRDGMS