Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_2623 |
Symbol | |
ID | 4111456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 2782423 |
End bp | 2783277 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638031748 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_639787 |
Protein GI | 108799590 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.795257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTGTACA TCGGGCTGAA ATCGCTGTGC AGGAGGCCCG ACCAACGAGA AAGGCGACAC GTTATAAACA GCAAATTCGC TACGCAGGCA GAGCTTTTCG GGCTCAGTGG TAAACGAGCC CTCGTCACCG GCGGCACCAG GGGAATCGGG ATGATGATCG CGCGCGGGCT CCTCCAGTCG GGTGCCCGCG TGGTCATCAG CTCGCGCAAC GCAGAAGCGT GCGCTCACGC GCGGAAGGAG CTGTCCGTAT ACGGCGACGT CTGGGCCGTG CCCGCCGATC TGTCCCGGCA CGACGAGTGT GAGCGCCTCG CCGACCTTGT CACAGCCGAA TCCGGGAAGC TCGACATCCT CGTCAACAAT GCGGGCGCAA TGTGGGACGA GCCGTTGGAG ACGTTCCCGG ACGAAGCCTG GAACACGGTC ATCGACCTCA ACCTGAAGTC GCCGTTCTGG CTCGTGCAGG CGCTGCTGCC GGCGCTCCGC AGCGCCGGTA CCGCCGACGA TCCTGCGCGG ATCATCAACA TCGGCAGCAT CGCTGCCATA CACATCCCCG CGCGGCCCAA CTACTCGTAC TCCAGCAGCA AGGCTGCGCT GCATCAACTC ACCAGAGTGC TCGCCAAGGA GCTTGGCCCG CAGCACATCA CGGTGAACGC GGTGGCGCCG GGACCGTTCC CGTCGACGAT GATGGCGGCA ACCCTCGACG AGTTCGGCGA GGCGATCGCG GCGTCGGCCC CGCTGCGCCG GATCGGCCGC GACGACGACA TGGCGGGTGT CGCCGTGTTC CTTGCCAGCC GGGCAGGCGC TTACCTCACG GGCGCCATCG TCCCCGTCGA CGGAGGGATC GCCACGACCG CGTGA
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Protein sequence | MLYIGLKSLC RRPDQRERRH VINSKFATQA ELFGLSGKRA LVTGGTRGIG MMIARGLLQS GARVVISSRN AEACAHARKE LSVYGDVWAV PADLSRHDEC ERLADLVTAE SGKLDILVNN AGAMWDEPLE TFPDEAWNTV IDLNLKSPFW LVQALLPALR SAGTADDPAR IINIGSIAAI HIPARPNYSY SSSKAALHQL TRVLAKELGP QHITVNAVAP GPFPSTMMAA TLDEFGEAIA ASAPLRRIGR DDDMAGVAVF LASRAGAYLT GAIVPVDGGI ATTA
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