| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2482 |
|---|
| Symbol | |
|---|
| ID | 4111315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 2638795 |
|---|
| End bp | 2639577 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638031607 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_639646 |
|---|
| Protein GI | 108799449 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.257102 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGACA CGGATAGCGG TTTGGTGGTG ATCTTCGGCG GCCGCAGCGA GATCGGCGTC
GAGGTGGCGA CACGGCTGGC GCCGGGCGCG ACCGTGGTGC TGGCCGCGCG TGGCGCCGAC
CGCCTCGACG AGCAGGTCTC CGCGGTGCAG TCGGCGGGCG CCGCGGCGGT GCACACCGTC
GAGTTCGACG CCGACGACCT CGGCTCGCAC GCCCCGTTGG TGGCGAAGCT GGTGGCCGAG
CACGGCCCGA TTGCCACCGC GGTCCTCGCC TTCGGCATCC TCGGCGACCA GGCCCGCGCC
GAACGCGACC CCGCGCATGC GGCGGCGATC GTGCACACCG ACTTCGTCGC ACAGGTCAGC
CTGCTCACGG TGCTGGCGAC GACGATGCGC GAGGCGGGCC GCGGGCCGTT GGTCGGTGAG
CGCCCCGCGC GAAGATCATC CATCGTCGTG TTCTCCTCGG TGGCCGGCGC CCGTGTCCGG
CGAGCCAACT ACGTCTACGG CTCGGCCAAG GCCGGACTCG ACGGTTTCGC CAACGGGCTG
GCCGACGCGC TGCACGGTTC GGGGGTGCAC CTGCTGCTCG TGCGGCCGGG CTTCGTGATC
GGGCGGATGA CCGCGGGGAT GGACCCCGCC CCGCTGTCGA GCACCCCGGC CCAGGTGGCC
GAGGCGACGG TGAAGGCGCT CGCCAAGGGG CGCCGTGAGG TGTGGATCCC ACGGTCGCTG
GGTGCCGCGG TGGTGGTCAT GCGGTTGATG CCGCGGTTCG TGTGGCGCAG GATGCCGAGG
TGA
|
|---|
| Protein sequence | MKDTDSGLVV IFGGRSEIGV EVATRLAPGA TVVLAARGAD RLDEQVSAVQ SAGAAAVHTV
EFDADDLGSH APLVAKLVAE HGPIATAVLA FGILGDQARA ERDPAHAAAI VHTDFVAQVS
LLTVLATTMR EAGRGPLVGE RPARRSSIVV FSSVAGARVR RANYVYGSAK AGLDGFANGL
ADALHGSGVH LLLVRPGFVI GRMTAGMDPA PLSSTPAQVA EATVKALAKG RREVWIPRSL
GAAVVVMRLM PRFVWRRMPR
|
|---|
| |