| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_2298 |
|---|
| Symbol | |
|---|
| ID | 4111131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 2438736 |
|---|
| End bp | 2439893 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638031423 |
|---|
| Product | acyl-CoA dehydrogenase-like protein |
|---|
| Protein accession | YP_639462 |
|---|
| Protein GI | 108799265 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00565066 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGACAG ACGTCACCTC GCCGGAAAGC CTGCTCTTCG CCTCGACGGC ACAGTCCTTC
CTCGAGAAAG AGGCGTCGCT GGCGCGGGTG CGCGAATTGC ACGCCGCGGG CACCTCTTTC
GACCCGCAGT GGTGGCAGCG CGCCGCCGAA CTGGGCTGGG CCAGCCTGCT GGTCCCCGAG
GAACTCGGCG GCGGCAGTGT CTCGGGCAAC GGGGTGGCCG ATCTGGCGCT CGTCGCCGAG
CAGATCGGCC GAACCGTGGC GCCGGGACCC CTGCACCCCG TCTCGACCGT GTTGGCGGGC
CTCGTCGACG CCGAGGAACC CGAACGTCAC AGCGCGCTCA TCGAGTCGCT GGTCAGTGGT
GAGTCCGTGG CGTCGTGGGC GGTCTACCGG CCGGGCCGCG GCTGGGCGCC GCACGACCCC
GGGGTGACGG CATCGGCCAC CGGATCGGGG TTCCGCCTCG ACGGCGTCGC CGACCGCGTG
GAGGCCGGCG GGGAGAGCGC CGTGCTGCTG GTGGTCACCG CATGCGACGG TGCGCTGCGT
CAGTTCCTGG TGCCGACCGA TGCGCCCGGC GTCACCGTCG AACCCCAGCG TTCGATCGAT
CTGGTCAAAC GCTATGCACG CGTTGAGTTC TCCAGCGTCG AGGTAGATGC TTCCGCGGCG
GTCGGCGCGG CGGAACAGAC CAGGGATCTC ATCGCCAGGC AGAGCCAGAT CGCACAGCTG
CTGCAGTGCG CCGAGGTGGT GGGCGTTCTC GGCGCGGTCG TCGACATGAC CGTCCAATGG
GCGTTCGACC GGCATTCGTT CGGCCGCCCG CTGGCCTCCT ACCAGGCACT CAAGCACCGG
TTCGCCGACC TGAGGATCGG CCTCGAGGCG TGCCGGGCGA CCACCCGCGC CGCCGTCGTA
TCGGTGGCCA CCAGGGCGGC CGACGCCGAT TTCAACGTCA GTGCGGCCAA ATCCTATGTG
GGCGAACATG CTTCACCGAT GATCCAGGAC TGCGTGCAGC TCCACGGCGG GATCGGGGTC
ACCTGGGAAC ACGATCTGCA CCTGTACCTG CGGCGGGCGA CGCTGTACCG GTCCCTGTAC
GGCACACCCG AGGACCACAA TCTGCGCGTC TATGCCCTCG CCGAAGAGGC CGCCACCGAC
GAGTTGGAGC CCGCCTGA
|
|---|
| Protein sequence | MTTDVTSPES LLFASTAQSF LEKEASLARV RELHAAGTSF DPQWWQRAAE LGWASLLVPE
ELGGGSVSGN GVADLALVAE QIGRTVAPGP LHPVSTVLAG LVDAEEPERH SALIESLVSG
ESVASWAVYR PGRGWAPHDP GVTASATGSG FRLDGVADRV EAGGESAVLL VVTACDGALR
QFLVPTDAPG VTVEPQRSID LVKRYARVEF SSVEVDASAA VGAAEQTRDL IARQSQIAQL
LQCAEVVGVL GAVVDMTVQW AFDRHSFGRP LASYQALKHR FADLRIGLEA CRATTRAAVV
SVATRAADAD FNVSAAKSYV GEHASPMIQD CVQLHGGIGV TWEHDLHLYL RRATLYRSLY
GTPEDHNLRV YALAEEAATD ELEPA
|
|---|
| |