Gene Mmcs_2248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_2248 
Symbol 
ID4111081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp2383438 
End bp2384406 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content68% 
IMG OID638031373 
Productpyridoxal biosynthesis lyase PdxS 
Protein accessionYP_639412 
Protein GI108799215 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0214] Pyridoxine biosynthesis enzyme 
TIGRFAM ID[TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTGT GGGCGCTACT ACACTGGATC AGTAGCGATT CGGAGGAGAT GACAGTGGGA 
TTCGAAGGGC AGCAGAACGG CTCGGCTCAT CAGACGGGCA CCGCCCGGGT GAAGCGCGGT
ATGGCCGAGA TGCTCAAGGG CGGCGTGATC ATGGACGTCG TCACCCCCGA GCAGGCGCGC
ATCGCCGAAG GCGCAGGCGC CGTCGCGGTG ATGGCGCTCG AGCGGGTCCC CGCCGACATC
CGCGCCCAGG GTGGCGTGTC CCGGATGAGC GACCCCGACA TGATCGAGGG CATCATCGAC
GCGGTCACGA TCCCGGTGAT GGCCAAGGCC CGCATCGGGC ACTTCGTCGA GGCCCAGATC
CTGCAGAGCC TCGGCGTGGA CTACGTCGAC GAGTCCGAGG TGTTGACACC CGCCGACTAC
ACCCACCACA TCGACAAGTG GAAGTTCACC GTTCCGTTCG TGTGCGGCGC CACCAACCTG
GGCGAGGCGC TGCGGCGCAT CACCGAGGGT GCGGCGATGA TCCGCTCCAA GGGTGAGGCC
GGCACCGGTG ACGTGTCCAA CGCCACCACC CACATGCGCA AGATTGGCGG CGAGATCCGC
CGCCTGACCT CGCTGTCGGA GGACGAACTG TACGTCGCGG CCAAGGAACT GCAGGCCCCG
TACGACCTGG TGGCCGAGGT GGCGCGGGCC GGCAAGCTGC CGGTCACGCT GTTCACCGCC
GGCGGTATCG CGACCCCGGC CGACGCGGCG ATGATGATGC AACTCGGCGC CGAGGGCGTA
TTCGTCGGAT CGGGCATCTT CAAATCCGGT AACCCCGCCG AGCGGGCCGC GGCGATCGTC
AAGGCGACGA CGTTCTACGA CGACCCCGAC GTGCTGGCCA AGGTGTCGCG CGGACTGGGT
GAGGCCATGG TCGGCATCAA CGTGGAGGAC ATCGCCCAGC CGCACCGGCT GGCCGAGCGC
GGCTGGTAA
 
Protein sequence
MDLWALLHWI SSDSEEMTVG FEGQQNGSAH QTGTARVKRG MAEMLKGGVI MDVVTPEQAR 
IAEGAGAVAV MALERVPADI RAQGGVSRMS DPDMIEGIID AVTIPVMAKA RIGHFVEAQI
LQSLGVDYVD ESEVLTPADY THHIDKWKFT VPFVCGATNL GEALRRITEG AAMIRSKGEA
GTGDVSNATT HMRKIGGEIR RLTSLSEDEL YVAAKELQAP YDLVAEVARA GKLPVTLFTA
GGIATPADAA MMMQLGAEGV FVGSGIFKSG NPAERAAAIV KATTFYDDPD VLAKVSRGLG
EAMVGINVED IAQPHRLAER GW