| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1999 |
|---|
| Symbol | |
|---|
| ID | 4110833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 2148110 |
|---|
| End bp | 2149624 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638031121 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_639164 |
|---|
| Protein GI | 108798967 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0525134 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAG AACTCGAGGC GTCCCCGCCG CCGGGGCGCG ACGCCCTGAT GACCACCGAA
CTCGTCCCCG AACAGATCCT GCCCAAGGTG ATGAGCACGT TCGGCCTCAC GGCCGCCTAC
GTCTTCATCA TCTGCTGGGT CACCGGATCG TCGGTGATGG CCGCAGGCGG GTGGACGGCC
ATCCCGATGT GGGTGCTCGG CATCCTCACC TTCCTGATCC CCGCGGGGAT GGCCGTGGTG
GAACTCGGCA ACCTGTGGCC GGGTCAGGGC GGGGTGTACA TCTGGGCCTA CCGCACCATG
GGGGAGACCT GGGGGTTCAT CGGCGGCTAT CTGTCGTGGG TGCCGGTGAT CCTCAACGCC
GCATCCTCGC CGGCCGTGGT GTTGCAGTTC CTGCTGCTGG CGTTCCACGC GGAACTGGGG
CTGACGATCA GCATCATCCT GCAGTTGGTC ATCCTGTGGA CGGTCATCGG GCTGGCGTTG
GCCAAACTCG CTGCGAACCA ACGGATCATG AACATCGTGT TCGTCGTCTA CGGCGTGCTC
ACGCTGACGA TCTTCATCTG CGGACTGCTG TATGCCGGCA AGAACGGTTC GGCCACCCCG
TTCTCCTGGG AAGAGGCGAC GATCCCGAAC TTCGCGGTCG CCGGCTTCCT GTACGGCACG
GTGCTGCTGT ACCTGCTCGG CGTCGAGACC CCGTACAACA TGGGTGCGGA GTTCCTCTCC
GTGCGCCGCA GCGGCCCGCG GATGATCCTG TGGGGGTCGA CCGCGCTCGT CGCGATCTAC
CTGCTCACCA CGCTAGGCAC CATGATGGCG CTGCCCGGTG ACGAGATCGA CCCGGTCACC
GGCATCATCG GCATGCTCGA CGTCGCCGGC TTCCCGGGTC TGATGGAGGT CTGCGCGGTC
GTGTTGGCGT TCATCATCAT CGTGGCGTTG ATGACCTACC AGGTCGCCTA CTCGCGGCTC
ATCTTCGTCT CCGGTCTCGA ACGCCACCTG CCGCGTATCT TCACCCACCT CAACCCGCGC
ACCCGTAACC CGGTGACGGC CATCCTGATC CAGGGCGTCA TCTCGTCACT GATCCTGGTC
GGGTTGTACT CGCAGAGCAG CATGGCCAAC GTCACCATCT ACCTGCAGGG CGGGCTGTCG
ACGGTGTGGC TGCTGTCCGG GTTCTTCTTC CTGTTCCCGG TCATCATCGC CCGTAGGAAG
TACGCGGATC GCTATGTCAA CGAACAGTTC TGGCGCATCC CCGGCGGGAT GGTCGGGGTG
TGGATCACCG TCGTCGTCGG CACGCTGGGC ACCATCGGCG GGATCTACTA CTCCTTCGTC
ACACCGTGGA TCGACGTGCC CGCCGCCACC TGGATGACGT GGGTGGGCGG CATCAGCCTG
GGCATGTTCG CGCTGGGTCT GGTCGTCTAC ATCTTCGGTC GCCGCTCGGC GCACAAGATG
ACCCAGGACG ACGCACTGGC GCACCTGGCG GTCCTCGATC TCAACAAATC CGACACCAGC
CCTGAAGGGG TGTGA
|
|---|
| Protein sequence | MTAELEASPP PGRDALMTTE LVPEQILPKV MSTFGLTAAY VFIICWVTGS SVMAAGGWTA
IPMWVLGILT FLIPAGMAVV ELGNLWPGQG GVYIWAYRTM GETWGFIGGY LSWVPVILNA
ASSPAVVLQF LLLAFHAELG LTISIILQLV ILWTVIGLAL AKLAANQRIM NIVFVVYGVL
TLTIFICGLL YAGKNGSATP FSWEEATIPN FAVAGFLYGT VLLYLLGVET PYNMGAEFLS
VRRSGPRMIL WGSTALVAIY LLTTLGTMMA LPGDEIDPVT GIIGMLDVAG FPGLMEVCAV
VLAFIIIVAL MTYQVAYSRL IFVSGLERHL PRIFTHLNPR TRNPVTAILI QGVISSLILV
GLYSQSSMAN VTIYLQGGLS TVWLLSGFFF LFPVIIARRK YADRYVNEQF WRIPGGMVGV
WITVVVGTLG TIGGIYYSFV TPWIDVPAAT WMTWVGGISL GMFALGLVVY IFGRRSAHKM
TQDDALAHLA VLDLNKSDTS PEGV
|
|---|
| |