Gene Mmcs_1972 details

Gene Information

• Locus tag: Mmcs_1972
• Symbol: rnhB
• ID: 4110806
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: +
• Start bp: 2119111
• End bp: 2119830
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 638031094
• Product: ribonuclease HII
• Protein accession: YP_639137
• Protein GI: 108798940
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0164] Ribonuclease HII

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.183482
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCCGGCGT CATGGCCGCC CCGCACGGTG ATCCGCAAGG CCTCCGGCCT GCGAACCCTC 
GAGTCCGCGC TGTACCGCAA CGGGCTCGGA CCGGTGGCCG GGGTGGACGA GGTGGGCCGC 
GGGGCCTGCG CGGGCCCGCT GGTGGTCGCG GCGTGCGTCC TCGGCCCGAA CCGGTTGGAG 
AGCCTCGCCG CGCTCGACGA TTCGAAGAAG CTCGGTGAGA AAGAGCGTGA GCGGCTGTTC 
CCGGTGATCC GTCGCTATGC GCTGGCCTAT CACGTGGTGT TCATCCCGTC CGAAGAGGTG 
GACCGCCGCG GTGTGCACGT CGCCAACATC GAGGGCATGC GGCGGGCGGT GGCCGGTCTG 
TCGGTGCGGC CGGGTTACGT GCTGTCCGAC GGATTCCGGG TTCCGGGGCT GCCGATGCCG 
TCGTTGCCGG TCGTCGGGGG TGACGCCGCG GCCGCCTGCA TCGCGGCGGC CAGCGTGCTG 
GCCAAGGTGA GCCGCGACCG GTTGATGGTG GCGATGGAGC GCGAGCATCC CGGCTACGGT 
TTCGCCGAGC ACAAGGGGTA CAGCACACCG GCGCACACCG CCGCGCTGGC CGAACTCGGC 
CCGTGCGCCC AGCACCGTTA CTCGTTCATC AACGTGCGCC GGTTGGTCAC CGCGGGTACC 
CCGCAGATCA GCGGGGGGCT GACCGACGCC GAACCCGGGC AGTGCTGTGA ACTCGGATAG 

 

Protein sequence

MPASWPPRTV IRKASGLRTL ESALYRNGLG PVAGVDEVGR GACAGPLVVA ACVLGPNRLE 
SLAALDDSKK LGEKERERLF PVIRRYALAY HVVFIPSEEV DRRGVHVANI EGMRRAVAGL 
SVRPGYVLSD GFRVPGLPMP SLPVVGGDAA AACIAAASVL AKVSRDRLMV AMEREHPGYG 
FAEHKGYSTP AHTAALAELG PCAQHRYSFI NVRRLVTAGT PQISGGLTDA EPGQCCELG