| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1799 |
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| Symbol | ligB |
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| ID | 4110633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium sp. MCS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008146 |
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| Strand | - |
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| Start bp | 1941759 |
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| End bp | 1943321 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638030919 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_638964 |
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| Protein GI | 108798767 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | [TIGR00574] DNA ligase I, ATP-dependent (dnl1) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.07397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGCTCG TCGATGTCGC CACCGCGTCG GTCGACGTCG GCGCGATGTC GTCGCGGCTG
GCCAAGACGG CCAGGATCGC CGATCTGCTG AGCCGCGCGG GCACCGAACA GGATGCCCGG
CTCGTCGCGG TGACGGTGGC GTGGCTGTCC GGTGAACTCC CCCAGCGCCA GATCGGTGTC
GGCTGGGCGG CCTTGCGTTC GCTCCCGGCC CCGGCCGCCG CGCCCACACT GACCGTGACG
GCGGTCGACG CGGTGTTCTC CGAGATCGGC GCGGTGGCCG GAAAAGGTTC GCAGGCCCGC
CGGGCGGGTC TCATCGCCGA GTTGTTCGCC GCCGCCACCG ACGTCGAGCA GACCTTCCTG
CGCCGCCTGC TGACCGGGGA ACTGCGTCAG GGGGCGTTGA TCGGGGTGAT GGCCGACGCC
GTCGCCAAGG CCGCCGATGT GCCCGCCGCC CGGGTGCGCC GGGCGGCGAT GCTCGCCGGT
GACCTGCCCG CGGTGGCCGC CGCTGTGCTC GCCGGAGGGG ACGCCGCGCT GGCCCGGTTC
ACCCTGCAGG TGGGCCGGCC CGTCGGGCCG ATGCTCGCCC AGACCGCAAC GGGAGTCGCC
GACGCACTGG ACCGGTTGGG CGGCACGGCG GTGTTCGAGG CGAAACTCGA CGGCGCCCGC
GTGCAGATCC ACCGTCGGGG ATCGGACGTG TCGGTGTACA CCCGATCCCT CGACGACGTC
ACCGCGCGCC TGCCGGAGGT CGTCGAGGCT GCGCTCGCAC TGCCGGTCAC CGACCTGATC
GCCGACGCCG AGGCGATCGC GCTGCGCCCG GACGGCCGCC CGCACCGGTT CCAGGTGACC
GCATCGCGGT TCGGCCGGGC GGCAGCGCGC GCCACGCAGC CGCTGTCGGT GTTCATGTTC
GACCTGCTGC ACGTCGACGG CGCCGATCTG CTCGATCAGC CGACCAGCGA CCGGGTGCGC
GTCCTCGACG ACCTCGTGCC CGCGGCGCAC CGCGTCGACC GGCTCGTCAC CGACGACGGC
GCCGCCGCGC AGCGGTTCCT GGAGGCGACG CTCGCCGCCG GACACGAGGG CGTGATGGCG
AAGTCACCGA ACGCGCCGTA CGAAGCGGGC CGCCGCGGGG CGGGCTGGTT GAAGGTCAAA
CCCGTCCACA CCCTCGATCT GGTCGTGCTC GCCGTCGAAT GGGGCAGCGG CAGGCGCACC
GGGAAGCTGT CCAACATCCA CCTCGGCGCC CGCGACCCCG CGACCGGGGG TTTCGTCATG
CTGGGCAAGA CGTTCAAGGG GATGACCGAC GCGATGCTCG ACTGGCAGAC CGCCCGGTTC
CTCGAACTGG CCGACCCAGC CGCGCAGCCG GCGACATCCG GCCGCGATCC GACCGACGGC
CACACCGTCA AGGTCCGGCC CGAACAGGTG GTCGAGATCG CGTTCGACGG CGTCCAGGGT
TCGACGCGGT ATCCGGGCGG CATGGCATTG CGGTTCGCCC GCGTCCTGCG CTACCGCGAC
GACAAATCGC CGGCCGAGGC GGATACGGTC GACACCGTCC GTGCCTTCTA CGAGCACGGC
TGA
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| Protein sequence | MLLVDVATAS VDVGAMSSRL AKTARIADLL SRAGTEQDAR LVAVTVAWLS GELPQRQIGV
GWAALRSLPA PAAAPTLTVT AVDAVFSEIG AVAGKGSQAR RAGLIAELFA AATDVEQTFL
RRLLTGELRQ GALIGVMADA VAKAADVPAA RVRRAAMLAG DLPAVAAAVL AGGDAALARF
TLQVGRPVGP MLAQTATGVA DALDRLGGTA VFEAKLDGAR VQIHRRGSDV SVYTRSLDDV
TARLPEVVEA ALALPVTDLI ADAEAIALRP DGRPHRFQVT ASRFGRAAAR ATQPLSVFMF
DLLHVDGADL LDQPTSDRVR VLDDLVPAAH RVDRLVTDDG AAAQRFLEAT LAAGHEGVMA
KSPNAPYEAG RRGAGWLKVK PVHTLDLVVL AVEWGSGRRT GKLSNIHLGA RDPATGGFVM
LGKTFKGMTD AMLDWQTARF LELADPAAQP ATSGRDPTDG HTVKVRPEQV VEIAFDGVQG
STRYPGGMAL RFARVLRYRD DKSPAEADTV DTVRAFYEHG
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