| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1577 |
|---|
| Symbol | |
|---|
| ID | 4110413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 1715630 |
|---|
| End bp | 1716970 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638030698 |
|---|
| Product | NADH dehydrogenase subunit D |
|---|
| Protein accession | YP_638744 |
|---|
| Protein GI | 108798547 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
|---|
| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTC CCCCCGGCCC GCCCAACGCG GGCGGTGACG CGCGCACCGG CACCGACACG
GTGATCGTCG TCGGCGGTGA GGACTGGGAG CAGGTCGTCG CCGCCGCCGA ACAGGCGCAG
GCCGGTGAGC GCATCGTCGT GAACATGGGA CCGCAGCACC CCTCGACACA CGGCGTGCTG
CGGTTGATCC TCGAGATCGA GGGCGAGACG ATCACCGAAG CCCGTTGCGG TATCGGCTAT
CTGCATACCG GCATCGAGAA GAACCTGGAG TACCGGAACT GGACGCAGGG CGTCACCTTC
GTCACCCGGA TGGACTACCT GTCGCCGTTC TTCAACGAGA CCGCCTACTG CCTGGGTGTG
GAGAAACTGC TCGGCGTCAC CGACGCGATC CCGGAGCGCG TCAACGTGAT CCGGGTGATG
TTGATGGAAC TCAACCGGAT CTCCTCGCAT CTGGTCGCAC TGGCGACCGG CGGGATGGAA
CTCGGGGCGA TGAGCGCGAT GTTCTACGGC TTCCGGGAGC GCGAGGAGAT CCTGTCGGTG
TTCGAGATGA TCACCGGGTT GCGGATGAAC CACGCGTACA TCCGGCCCGG CGGGCTGGCC
GCCGACCTGC CCGACGGTGC GGTCCCCCGC ATCCGCGAAC TGCTCGCGCT GCTCCCCGGG
CGGCTGCGCG ACCTGGAGAA CCTGCTCAAC GAGAACTACA TCTGGAAGGC CCGCACGCAG
GGCATCGGCT ACCTCGACCT GGCCGGCTGC ATGGCACTCG GCATCACGGG CCCGGTGCTG
CGCTCGACCG GGCTGCCGCA CGATCTGCGC CGGGCCCAAC CGTACTGCGG TTACGAGGAC
TACGAATTCG ACGTGATCAC CGACGACGGC TGCGACGCCT ACGGCCGCTA CCTCATCCGG
GTGAAGGAGA TGCGTGAATC GCTCAAGATC GTCGAACAGT GTGTGGACCG ATTGAAGCCC
GGACCGGTGA TGATCGCGGA CAAGAAGCTC GCCTGGCCGG CCGACCTCGA ACTGGGACCC
GACGGCCTCG GCAACTCCCC CGCCCACATC GCCCGCATCA TGGGGCAGTC GATGGAGGGC
CTGATCCACC ACTTCAAGCT GGTGACCGAG GGTATCCGGG TGCCGGCCGG ACAGGTGTAC
ACGGCCGTGG AGTCGCCACG CGGCGAACTG GGGGTGCACA TGGTCTCCGA CGGTGGAACC
CGGCCCTACC GCGTCCACTA CCGCGACCCG TCGTTCACGA ATCTGCAAGC GGTGGCGGCG
ATGTGCGAGG GCGGGATGGT CGCCGACGCC ATCTCGGCGG TCGCGTCGAT CGACCCGGTC
ATGGGCGGGG TGGATAGGTG A
|
|---|
| Protein sequence | MTTPPGPPNA GGDARTGTDT VIVVGGEDWE QVVAAAEQAQ AGERIVVNMG PQHPSTHGVL
RLILEIEGET ITEARCGIGY LHTGIEKNLE YRNWTQGVTF VTRMDYLSPF FNETAYCLGV
EKLLGVTDAI PERVNVIRVM LMELNRISSH LVALATGGME LGAMSAMFYG FREREEILSV
FEMITGLRMN HAYIRPGGLA ADLPDGAVPR IRELLALLPG RLRDLENLLN ENYIWKARTQ
GIGYLDLAGC MALGITGPVL RSTGLPHDLR RAQPYCGYED YEFDVITDDG CDAYGRYLIR
VKEMRESLKI VEQCVDRLKP GPVMIADKKL AWPADLELGP DGLGNSPAHI ARIMGQSMEG
LIHHFKLVTE GIRVPAGQVY TAVESPRGEL GVHMVSDGGT RPYRVHYRDP SFTNLQAVAA
MCEGGMVADA ISAVASIDPV MGGVDR
|
|---|
| |