Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_1403 |
Symbol | |
ID | 4110240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 1515779 |
End bp | 1518934 |
Gene Length | 3156 bp |
Protein Length | 1051 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 638030524 |
Product | UvrD/REP helicase |
Protein accession | YP_638571 |
Protein GI | 108798374 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAC CGGACGTCGA AGCGACCACC GCCGCGCACA CCGAGCCGCG CTCGCTGCTC GAGCCGGGGC GGCGCGGTGT GGTGCGTCTG TTCGGCGGTC CCGGCACCGG GAAGTCGACG CTGCTCGTCG ACACCGCGGC CGCGCACATC GCCGCCGGCG TCGATCCGGA ATCGGTTCTG CTCCTGACCG GTTCGGCGTC GCTCCGGTCG GCGGCCCGCG CGGCGGTCAC CCGCAGACTG CTCGACGGCG GCGCCCGCCA GGTGGTGCGC GCACCACTGG TCCGCACGGT CCACTCCTAT GCGTTCGCGG TGCTGCGGCT GGCCGCCCAG CGCAACGGCG ACGCGCCGCC GCGGCTGATC ACCAGCGCCG AACAGGACGG GATCATCCGC GAACTGCTCG CAGGCGACCT CGAGGACGGT GACCGTTCGG CCGTCGCCTG GCCGGCCGCA CTGCGCCCGG CACTCACCAC CGCCGGATTC GCCACCGAAC TGCGCGACCT GATGGCCCGG TGCACCGAAC GCGGTGTCGA TCCTGTTGCG CTGCAACGCC TCGGCCGGTT GTCCCGCCGC CCGGAATGGG CCGCCGCCGG CCGGTTCGCG CAGGCCTACG AGCAGATCAT GCTGCTGCGC TCGGCGGTCG GCATGGCCGC TCCCCAGGCG ACGACGCCCG CACTCGGGGC GGCCGAACTC GTCGGCGCCG CACTCGAGGC GTTCGCCATG GACGCCGATC TGCTGGCGGC CGAACGCAAC CGCATCGGAC TACTCCTGGT CGACGACGCC CAGCACCTCG ACCCGCAGGC CGCCCGGCTG GTGCGGGTAC TGGCCGCCGG TGCCGATCTG ACCGTATTCG CCGGTGACCC CGACCAATCG GTGTTCGGCT ACCGCGGCGC GGACCCGGCA CTGCTGCGCA CGGAGGAGGG CAGCGCGATC GTCCTGACCC GCTCACACCG TTGCGCACCC GCGGTGGCGC GTGCGATGAG CGGAATCGCG CGGCGCCTGC CCGGGCCGCG CCCTGAATTC GTCGGCAACG AGGACGGCCG CGGTGACGGC TCGGTCGCGG TACGGGTCGC CGCGACGGCC CATGCCGAAT CGGCGCTCAT CGCCGATGCG CTTCGCCGCG CGCACCTCGT CGACGGGGTG CCGTGGTCCG AGATGGCCGT CATCGTGCGC TCACTGCCGC GTGCCGGGGC GCCGCTGGCC CGTGCGCTGA CCGCCGCCGG GGTTCCCGTC GACCTGCCCG CGGCCGCACC GCTGGTCGAG GAGCCGGCCG CGCGCGCCCT GCTGACGGTG CTCGAGGCCA CCGCCGACGG TTTGACCGGA GCCCAGGCCG AGGCGCTGCT CTCCGGCCCG GTCGGCCGGG TCGATCCGGT CACAATGCGC CAGGTGCGCC GGGCGCTGCG CCGCGCCGAC GGTAGCCAGC CCCCACGTGA GTTCACCGAC CTGCTCGTCG ACGCGCTCAC CGGCCCCTTG CCGGCGGCGT CGGACGTGTC GGCCGAACTG CAGCGGCCGC TGCGCCGCGT CCGGTCCGTG CTCGCGGCCG CGCGCCGCAG CGTCGACGAC GGACTCGACC CCCGGCACAC CCTCTGGCAG GCCTGGCACC GCAGCGGGCT GCAGCGGCGG TGGCTCGCGG CCAGTGAACG CGGCGGAGCC GCGGGCGCCC AGGCGGATCG CGACCTCGAC GCCGTCACCG CCCTGTTCGA CGTCGCCGAC CAGTACGTGA CCCGCACCGC GGGGGCGTCG GTGCGCGGTC TCCTCGACCA TGTCGCCGCG CTCGGCCTGC CGCCCGGCCG CCGCGGTGAG CGGCGCGACC CGGAGGCCGT CGCGGTGCTC AGCGCCCATG CCGCGTTGGC GGGCGAATGG GACCTCGTCG TGGTCGCCGG GCTGCAGGAA GGCCTGTGGC CGAACACGAT CCCGCGCGGC GGGGTCCTGG GCACCCAACG CCTGGTCGAC GTGCTCGACG GCGTGACCGA TTCCGCGTCC GACGCGGTGT CGACGCGCGC ACCGCTGCTC GCCGAGGAAC GCCGGCTGCT GATCGCCGCG CTCGGCCGCG CCCGGCGCCG GGTCCTGGTG ACCGCCGTCG ACAGCGACTC GGGCGCCGAA GCGATGTTGC CGTCGCCGTT CTGCCAGGAA CTGACCGCAC TGGCCACCGA TCCGGGTGAC GGTCCGCCCG CCCCCGTGCG GGCGCCGCGC GTGCTGGCGC CGTCGGCGCT GGTCGGCCGG CTGCGGGCGG TGGTGTGCGC CCCCGACGGC GCCGTCGACG ACGCGGCCCG CGAGTGCGCG GCCGCCCAGC TGGCGCGACT GGCCGCGGCG GGCGTCCCCG GCGCCGACCC CGGTCAGTGG CACGCCATGA CGGCGCTGTC CACCGACGAG CCGTTGTGGA ACGACGAGCA GCAGGTGGTC ACGCTGTCGC CATCGACGCT GCAGGCCCTG ACCGACTGCC CGCTGCGCTG GCTGCTCGAA CGCCACGGTG GGCGTGATGG TCGTGACGTT CGTTCGGCGG TCGGATCGCT GCTGCACGCG CTGGTCTCCG AACCGGGCAG GACCGAGAGC CAGCTGCTCA ACGACCTCGA GCGGGTGTGG GCGGACCTGC CGTACGAGGC GCAGTGGCAC GCCGACAACG AACTCACCCG CCATCAGGCC ATGCTGTCGG CGTTCGAGCA GTGGCGCGCC CAGACCCGCC GCGAGCTGAC CGAGGTCGGC ACCGAGATCG ACGTCGACGG TGTCGTCTGC GACGCCGACG ACGGCAGGCC CGCGGTCCGG GTGCGCGGCC GCCTCGACCG GCTGGAGCGC GACAGCGCCG GCCGGCTCGT CGTCGTGGAC ATCAAGACCG GTAAGAGCCC GGTCACCAAG GACGACGCCC AGCGGCACGC CCAGCTGGCG ATGTACCAAC TGGCCGTCGC GGCGGGCCTG CTCGCCGAGG GTGACGTGCC CGGCGGCGGC AAACTGGTCT ACCTGGGCAA GAGCGGTGCG GCCGGGCCGA CCGAACGCGA ACAGGACGCG CTGACCCCCG AGACCGTCGC GCAGTGGCGG CAGGACGTCG GCGAGGCCGC CGCCGCCACC CAGGGGCCGG GGTTCGTCGC ACGGGTCAAC GACAGCTGCG CGCACTGTCC GGTACGCAGC AGCTGCCCCG CCCAGTCCGC GGGCGAGCGC GCATGA
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Protein sequence | MTAPDVEATT AAHTEPRSLL EPGRRGVVRL FGGPGTGKST LLVDTAAAHI AAGVDPESVL LLTGSASLRS AARAAVTRRL LDGGARQVVR APLVRTVHSY AFAVLRLAAQ RNGDAPPRLI TSAEQDGIIR ELLAGDLEDG DRSAVAWPAA LRPALTTAGF ATELRDLMAR CTERGVDPVA LQRLGRLSRR PEWAAAGRFA QAYEQIMLLR SAVGMAAPQA TTPALGAAEL VGAALEAFAM DADLLAAERN RIGLLLVDDA QHLDPQAARL VRVLAAGADL TVFAGDPDQS VFGYRGADPA LLRTEEGSAI VLTRSHRCAP AVARAMSGIA RRLPGPRPEF VGNEDGRGDG SVAVRVAATA HAESALIADA LRRAHLVDGV PWSEMAVIVR SLPRAGAPLA RALTAAGVPV DLPAAAPLVE EPAARALLTV LEATADGLTG AQAEALLSGP VGRVDPVTMR QVRRALRRAD GSQPPREFTD LLVDALTGPL PAASDVSAEL QRPLRRVRSV LAAARRSVDD GLDPRHTLWQ AWHRSGLQRR WLAASERGGA AGAQADRDLD AVTALFDVAD QYVTRTAGAS VRGLLDHVAA LGLPPGRRGE RRDPEAVAVL SAHAALAGEW DLVVVAGLQE GLWPNTIPRG GVLGTQRLVD VLDGVTDSAS DAVSTRAPLL AEERRLLIAA LGRARRRVLV TAVDSDSGAE AMLPSPFCQE LTALATDPGD GPPAPVRAPR VLAPSALVGR LRAVVCAPDG AVDDAARECA AAQLARLAAA GVPGADPGQW HAMTALSTDE PLWNDEQQVV TLSPSTLQAL TDCPLRWLLE RHGGRDGRDV RSAVGSLLHA LVSEPGRTES QLLNDLERVW ADLPYEAQWH ADNELTRHQA MLSAFEQWRA QTRRELTEVG TEIDVDGVVC DADDGRPAVR VRGRLDRLER DSAGRLVVVD IKTGKSPVTK DDAQRHAQLA MYQLAVAAGL LAEGDVPGGG KLVYLGKSGA AGPTEREQDA LTPETVAQWR QDVGEAAAAT QGPGFVARVN DSCAHCPVRS SCPAQSAGER A
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