Gene Mmcs_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1318 
Symbol 
ID4110155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp1425089 
End bp1426561 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content69% 
IMG OID638030439 
Productcell envelope-related transcriptional attenuator 
Protein accessionYP_638486 
Protein GI108798289 
COG category[K] Transcription 
COG ID[COG1316] Transcriptional regulator 
TIGRFAM ID[TIGR00350] cell envelope-related function transcriptional attenuator common domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.940107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCTC GAGTCCTTCG CGCCGTCGCT GTGACGGTCA CCCTTGCCGT GGTGCTCGGG 
ACCGGTGTGG CCTGGAGCCG GATCCGGTCC TTCGAGGAGG GCATCAACCA CATCAGCTCC
GCGTCTCTCG GCGAAGGCGG CGAGGACGGC GCGATCGACG TCCTGCTGGT GGGGTCCGAC
AGCCGTACCG ACGCGCACGG CAACCCGCTG TCGGAGGAAG AGCTGGCCGT GCTGCGCGCC
GGCAACGACG TGTCCACCAA CACCGACACC ATCATCTTGA TCCGTATCCC CAACAACGGG
CAGTCGGCGA CGGCCATCTC GATCCCGCGC GATTCCTACG TCCAGGCCCC CGGGCTGGGC
AAGATGAAGA TCAACGGTGT GTACGGGTCG GTGCACCTCG AGAAGCTCAA AGAACTCGTC
GAGGAGCAGG GGATGGACCC CGCCGAGGCG GAGCCGCTGG CGGTCGAAGA CGGCCGCGAG
GCGTTGATCA AGACGGTCGC GAACCTCACC GGGGTGACCG TCGACCACTA CGCCGAGATC
GGGCTGCTGG GCTTCGCGCT GATCACCGAC GCCCTCGGCG GTGTCGATGT CTGCCTCAAA
GAACCTGTCT ACGAACCGCT TTCGGGTGCG GACTTCCCGG CCGGCTGGCA GAAGCTGAAC
GGGCCGCAGG CGTTGAGCTT CGTGCGTCAG CGCCACGATC TGCCGCGCGG CGACCTCGAC
CGGGTGACCC GCCAGCAGGC GGTGATGGCG TCGCTCGCCC ACGAGGTGAT CTCCAGCAAG
ACGCTGTCGA GCCCGGCGAC GCTGAGCCGG CTGGAGGCGG CCGTGCAGCG GTCGGTGGTG
CTCTCCGACG GCTGGGACAT CATGGATTTC GTCGACCAGC TGCAGAAGCT GGCCGCCGGC
AACGTCGCCT TCGCCACCAT CCCGGTGGTG CGTGAGGACG GCTGGAGCGA CGACGGTATG
CAGAGTGTGG TGCGTGTCGA CCCGGCGGCG GTCCAGGAGT GGGTCACGGG TCTGCTCAAC
GAACAGGACG AGGGCAAGAC CGAGGAGCTG GCCTACACAC CGGACAAGAC GACCGTCGAG
GTCGTCAACG CCACCGACAT CAACGGTCTG GCCGCTTCGG TGTCGACAGT GCTGTCGCAG
AAGGGATTCA CCCCCGGCGC GACCGGTAAC TTCGAGGGCG GTGCCGTCAC CGGCAGCCAG
GTGCGGGCGG CCAAGGCCGA CGATCTCGGC GCCCAAGCGG TGGCGAGGGA TCTGGGCGGA
CTCACCGTCG TGGAGGACGG TTCCGTGGCG CCGGGCACCG TGCGGGTGGT GCTCGCCGAC
GACTACACCG GCCCCGGCTC CGGACTCGAC GGCACGGACC CGACGCTGCT GGCCGCCGAC
CCGGTCGCCA CCGGGGCCAC CGATCCGGCC GCACCACCGC CGCCCCCGCA GATCATCACC
GCCGGTTCCG ATGACCCGGA GTGTGTGAAC TGA
 
Protein sequence
MPARVLRAVA VTVTLAVVLG TGVAWSRIRS FEEGINHISS ASLGEGGEDG AIDVLLVGSD 
SRTDAHGNPL SEEELAVLRA GNDVSTNTDT IILIRIPNNG QSATAISIPR DSYVQAPGLG
KMKINGVYGS VHLEKLKELV EEQGMDPAEA EPLAVEDGRE ALIKTVANLT GVTVDHYAEI
GLLGFALITD ALGGVDVCLK EPVYEPLSGA DFPAGWQKLN GPQALSFVRQ RHDLPRGDLD
RVTRQQAVMA SLAHEVISSK TLSSPATLSR LEAAVQRSVV LSDGWDIMDF VDQLQKLAAG
NVAFATIPVV REDGWSDDGM QSVVRVDPAA VQEWVTGLLN EQDEGKTEEL AYTPDKTTVE
VVNATDINGL AASVSTVLSQ KGFTPGATGN FEGGAVTGSQ VRAAKADDLG AQAVARDLGG
LTVVEDGSVA PGTVRVVLAD DYTGPGSGLD GTDPTLLAAD PVATGATDPA APPPPPQIIT
AGSDDPECVN